Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G31910 Arabidopsis lyrata HOM05D003074 ORTHO05D002434 6.7e-45 184.1 129 100.0
AT4G21920 Arabidopsis thaliana HOM05D003074 ORTHO05D002434 4.4e-36 154.8 130 89.2
Carub.0007s1942 Capsella rubella HOM05D003074 ORTHO05D002434 8.3e-35 150.6 133 82.0
CARHR228720 Cardamine hirsuta HOM05D003074 ORTHO05D002434 2.6e-28 129.0 133 79.7
Thhalv10026602m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 2.3e-24 115.9 130 61.5
Sp7g20110 Schrenkiella parvula HOM05D003074 ORTHO05D002434 6.1e-22 107.8 72 75.0
BcaNung00825 Brassica carinata HOM05D003074 ORTHO05D002434 9.8e-20 100.5 71 64.8
A03p53050 Brassica napus HOM05D003074 ORTHO05D002434 9.8e-20 100.5 71 64.8
C07p51480 Brassica napus HOM05D003074 ORTHO05D002434 9.8e-20 100.5 71 64.8
BolC7t45644H Brassica oleracea HOM05D003074 ORTHO05D002434 9.8e-20 100.5 71 64.8
BraA03t14377Z Brassica rapa HOM05D003074 ORTHO05D002434 9.8e-20 100.5 71 64.8
BcaNung01717 Brassica carinata HOM05D003074 ORTHO05D002434 1.7e-19 99.8 72 68.1
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 3.5e-17 92.0 131 44.3
Aa31LG6G3910 Aethionema arabicum HOM05D003074 ORTHO05D002434 7.8e-17 90.9 130 43.8
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 4.9e-11 71.6 129 36.4
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 2.7e-09 65.9 126 30.2
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.7e-09 65.9 130 30.8
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 6.0e-09 64.7 134 31.3
FvH4_3g02220 Fragaria vesca HOM05D003074 ORTHO05D002434 6.0e-09 64.7 73 43.8
FAN01G1682 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.0e-09 64.7 73 43.8
FAN08G3684 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.0e-09 64.7 73 43.8
FAN25G1645 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.0e-09 64.7 73 43.8
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 7.8e-09 64.3 67 47.8
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 1.0e-08 63.9 68 44.1
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 1.0e-08 63.9 68 44.1
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 1.7e-08 63.2 69 44.9
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 1.7e-08 63.2 71 42.3
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 2.3e-08 62.8 128 31.2
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 3.0e-08 62.4 67 41.8
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 3.0e-08 62.4 130 30.8
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.9e-08 62.0 69 44.9
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 62.0 68 42.6
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 62.0 66 40.9
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.9e-08 62.0 68 42.6
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 5.0e-08 61.6 128 29.7
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 5.0e-08 61.6 134 30.6
FAN26G1625 Fragaria x ananassa HOM05D003074 ORTHO05D002434 6.6e-08 61.2 73 42.5
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.5e-07 60.1 137 29.2
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 1.5e-07 60.1 66 40.9
Lalb_Chr04g0248431 Lupinus albus HOM05D003074 ORTHO05D002434 1.9e-07 59.7 66 43.9
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 2.5e-07 59.3 67 41.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 3.3e-07 58.9 69 42.0
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 4.3e-07 58.5 126 29.4
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 4.3e-07 58.5 66 48.5
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 4.3e-07 58.5 67 41.8
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 5.6e-07 58.2 75 41.3
PGR042G1468 Punica granatum HOM05D003074 ORTHO05D002434 5.6e-07 58.2 61 44.3
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 5.6e-07 58.2 67 37.3
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 5.6e-07 58.2 133 34.6
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 9.5e-07 57.4 67 40.3
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 9.5e-07 57.4 126 31.0
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 9.5e-07 57.4 66 39.4
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 9.5e-07 57.4 139 29.5
Gorai.010G252600 Gossypium raimondii HOM05D003074 ORTHO05D002434 9.5e-07 57.4 64 45.3
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 9.5e-07 57.4 134 28.4
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 9.5e-07 57.4 65 40.0
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.2e-06 57.0 64 40.6
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 1.6e-06 56.6 74 39.2
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.6e-06 56.6 129 31.8
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.6e-06 56.6 71 36.6
Gohir.D06G213500 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.1e-06 56.2 64 45.3
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.1e-06 56.2 71 36.6
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 2.1e-06 56.2 66 45.5
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 2.1e-06 56.2 66 45.5
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 2.1e-06 56.2 70 41.4
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 2.1e-06 56.2 70 41.4
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 2.1e-06 56.2 73 42.5
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 3.6e-06 55.5 65 41.5
Phvul.008G267000 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 3.6e-06 55.5 65 43.1
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.6e-06 55.5 64 40.6
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 4.7e-06 55.1 63 46.0
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 4.7e-06 55.1 66 39.4
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.7e-06 55.1 129 27.1
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.7e-06 55.1 129 26.4
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.7e-06 55.1 129 26.4
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 4.7e-06 55.1 63 39.7
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 6.2e-06 54.7 68 42.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 6.2e-06 54.7 126 28.6
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 6.2e-06 54.7 71 33.8
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.2e-06 54.7 127 33.1
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 8.1e-06 54.3 66 37.9
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 8.1e-06 54.3 63 41.3


User provided reference genes

Program Settings