Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G30956 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 5.2e-60 234.2 117 100.0
AT4G22640 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 2.1e-53 212.2 114 89.5
Carub.0007s1867 Capsella rubella HOM05D008927 ORTHO05D011107 4.8e-42 174.5 114 72.8
CARHR229520 Cardamine hirsuta HOM05D008927 ORTHO05D011107 8.3e-34 147.1 102 67.6
Thhalv10026519m.g Eutrema salsugineum HOM05D008927 ORTHO05D011107 5.6e-30 134.4 118 59.3
C01p16930 Brassica napus HOM05D008927 ORTHO05D011107 3.4e-27 125.2 117 56.4
BcaC09g51134 Brassica carinata HOM05D008927 ORTHO05D011107 4.4e-27 124.8 118 55.9
BcaC09g51135 Brassica carinata HOM05D008927 ORTHO05D011107 4.4e-27 124.8 118 55.9
BolC1t01633H Brassica oleracea HOM05D008927 ORTHO05D011107 2.2e-26 122.5 117 55.6
A01p13900 Brassica napus HOM05D008927 ORTHO05D011107 6.4e-26 120.9 117 54.7
BraA01t01336Z Brassica rapa HOM05D008927 ORTHO05D011107 6.4e-26 120.9 117 54.7
Sp7g20670 Schrenkiella parvula HOM05D008927 ORTHO05D011107 9.2e-25 117.1 115 52.2
BcaB03g11738 Brassica carinata HOM05D008927 ORTHO05D011107 6.6e-23 110.9 137 46.7
BcaC01g00790 Brassica carinata HOM05D008927 ORTHO05D011107 9.5e-22 107.1 145 46.2
C03p84300 Brassica napus HOM05D008927 ORTHO05D011107 2.8e-21 105.5 145 46.2
A08p15850 Brassica napus HOM05D008927 ORTHO05D011107 6.2e-21 104.4 145 45.5
BolC3t20715H Brassica oleracea HOM05D008927 ORTHO05D011107 1.4e-20 103.2 136 48.5
Sp7g20680 Schrenkiella parvula HOM05D008927 ORTHO05D011107 2.3e-20 102.4 134 47.0
BraA08t33561Z Brassica rapa HOM05D008927 ORTHO05D011107 3.1e-20 102.1 154 43.5
CARHR229510 Cardamine hirsuta HOM05D008927 ORTHO05D011107 6.8e-20 100.9 117 52.1
CARHR229550 Cardamine hirsuta HOM05D008927 ORTHO05D011107 2.2e-18 95.9 117 43.6
A08p15860 Brassica napus HOM05D008927 ORTHO05D011107 1.4e-17 93.2 114 40.4
BraA08t33562Z Brassica rapa HOM05D008927 ORTHO05D011107 1.4e-17 93.2 114 40.4
Thhalv10026252m.g Eutrema salsugineum HOM05D008927 ORTHO05D011107 2.4e-17 92.4 117 44.4
Carub.0007s1866 Capsella rubella HOM05D008927 ORTHO05D011107 3.2e-17 92.0 114 41.2
AT4G22666 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 7.0e-17 90.9 117 39.3
BolC3t20717H Brassica oleracea HOM05D008927 ORTHO05D011107 7.0e-17 90.9 112 39.3
BcaC01g00791 Brassica carinata HOM05D008927 ORTHO05D011107 1.2e-16 90.1 112 39.3
C03p84310 Brassica napus HOM05D008927 ORTHO05D011107 1.2e-16 90.1 112 39.3
BcaB03g11739 Brassica carinata HOM05D008927 ORTHO05D011107 2.7e-16 89.0 112 39.3
CARHR229530 Cardamine hirsuta HOM05D008927 ORTHO05D011107 4.6e-16 88.2 113 44.2
AL7G30952 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 1.7e-15 86.3 114 39.5
AT4G22650 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 5.6e-14 81.3 121 41.3
AT4G22630 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 1.4e-12 76.6 117 40.2
AL7G30930 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 3.1e-12 75.5 131 34.4
Aa31LG6G4610 Aethionema arabicum HOM05D008927 ORTHO05D011107 6.8e-12 74.3 107 33.6
THA.LOC104813776 Tarenaya hassleriana HOM05D008927 ORTHO05D011107 6.6e-07 57.8 109 33.0
CARHR229560 Cardamine hirsuta HOM05D008927 ORTHO05D011107 4.3e-06 55.1 112 33.9


User provided reference genes

Program Settings