Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G30930 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 3.6e-81 305.1 178 100.0
AL7G30952 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 1.0e-67 260.4 178 90.4
AT4G22666 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 1.2e-60 236.9 178 73.0
Carub.0007s1866 Capsella rubella HOM05D008927 ORTHO05D011107 1.1e-50 203.8 184 69.0
C03p84310 Brassica napus HOM05D008927 ORTHO05D011107 1.8e-43 179.9 183 62.3
BraA08t33562Z Brassica rapa HOM05D008927 ORTHO05D011107 2.5e-42 176.0 184 63.0
A08p15860 Brassica napus HOM05D008927 ORTHO05D011107 7.4e-42 174.5 184 62.5
CARHR229550 Cardamine hirsuta HOM05D008927 ORTHO05D011107 4.8e-41 171.8 133 67.7
BcaB03g11739 Brassica carinata HOM05D008927 ORTHO05D011107 2.4e-40 169.5 133 66.9
BcaC01g00791 Brassica carinata HOM05D008927 ORTHO05D011107 1.0e-38 164.1 133 64.7
BolC3t20717H Brassica oleracea HOM05D008927 ORTHO05D011107 1.3e-38 163.7 131 65.6
Thhalv10026252m.g Eutrema salsugineum HOM05D008927 ORTHO05D011107 4.9e-38 161.8 189 57.1
Aa31LG6G4610 Aethionema arabicum HOM05D008927 ORTHO05D011107 7.2e-29 131.3 169 54.4
BcaB03g11738 Brassica carinata HOM05D008927 ORTHO05D011107 5.5e-21 105.1 193 40.9
BraA08t33561Z Brassica rapa HOM05D008927 ORTHO05D011107 1.8e-19 100.1 143 43.4
BcaC01g00790 Brassica carinata HOM05D008927 ORTHO05D011107 1.1e-18 97.4 144 43.1
Sp7g20680 Schrenkiella parvula HOM05D008927 ORTHO05D011107 3.3e-18 95.9 190 35.8
AT4G22630 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 4.4e-18 95.5 183 35.5
A08p15850 Brassica napus HOM05D008927 ORTHO05D011107 5.7e-18 95.1 143 46.2
BcaC09g51134 Brassica carinata HOM05D008927 ORTHO05D011107 7.4e-18 94.7 167 34.7
Thhalv10026519m.g Eutrema salsugineum HOM05D008927 ORTHO05D011107 7.4e-18 94.7 181 35.4
C03p84300 Brassica napus HOM05D008927 ORTHO05D011107 1.7e-17 93.6 211 36.5
BolC3t20715H Brassica oleracea HOM05D008927 ORTHO05D011107 2.8e-17 92.8 202 37.6
BcaC09g51135 Brassica carinata HOM05D008927 ORTHO05D011107 1.1e-16 90.9 167 33.5
Sp7g20670 Schrenkiella parvula HOM05D008927 ORTHO05D011107 5.3e-16 88.6 167 34.7
CARHR229520 Cardamine hirsuta HOM05D008927 ORTHO05D011107 6.9e-16 88.2 166 35.5
C01p16930 Brassica napus HOM05D008927 ORTHO05D011107 1.2e-15 87.4 168 33.3
AT4G22640 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 1.5e-15 87.0 179 33.5
BolC1t01633H Brassica oleracea HOM05D008927 ORTHO05D011107 2.6e-15 86.3 168 33.3
A01p13900 Brassica napus HOM05D008927 ORTHO05D011107 5.9e-15 85.1 168 33.3
BraA01t01336Z Brassica rapa HOM05D008927 ORTHO05D011107 5.9e-15 85.1 168 33.3
CARHR229560 Cardamine hirsuta HOM05D008927 ORTHO05D011107 1.0e-14 84.3 132 43.9
Carub.0007s1867 Capsella rubella HOM05D008927 ORTHO05D011107 9.4e-13 77.8 122 36.1
CARHR229510 Cardamine hirsuta HOM05D008927 ORTHO05D011107 2.7e-12 76.3 170 35.3
CARHR229530 Cardamine hirsuta HOM05D008927 ORTHO05D011107 2.7e-12 76.3 122 37.7
AL7G30956 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 1.4e-11 73.9 131 34.4
AT4G22650 Arabidopsis thaliana HOM05D008927 ORTHO05D011107 1.7e-09 67.0 134 33.6
THA.LOC104813776 Tarenaya hassleriana HOM05D008927 ORTHO05D011107 1.8e-08 63.5 124 36.3
AL7G30954 Arabidopsis lyrata HOM05D008927 ORTHO05D011107 6.5e-06 55.1 82 36.6


User provided reference genes

Program Settings