Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G29480 Arabidopsis lyrata HOM05D009622 ORTHO05D011757 2.0e-104 382.5 199 100.0
AT4G23880 Arabidopsis thaliana HOM05D009622 ORTHO05D011757 2.5e-91 339.0 200 90.5
Carub.0007s1725 Capsella rubella HOM05D009622 ORTHO05D011757 1.5e-80 303.1 198 80.8
CARHR231260 Cardamine hirsuta HOM05D009622 ORTHO05D011757 1.0e-76 290.4 200 78.5
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 1.2e-72 276.9 198 73.7
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 1.2e-72 276.9 198 73.7
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 1.2e-72 276.9 198 73.7
A03p54810 Brassica napus HOM05D009622 ORTHO05D011757 1.2e-69 266.9 203 71.9
BraA03t14548Z Brassica rapa HOM05D009622 ORTHO05D011757 1.2e-69 266.9 203 71.9
Sp7g21830 Schrenkiella parvula HOM05D009622 ORTHO05D011757 1.6e-66 256.5 191 77.5
Thhalv10026259m.g Eutrema salsugineum HOM05D009622 ORTHO05D011757 3.7e-66 255.4 206 71.8
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 1.4e-60 236.9 175 73.1
BcaNung04082 Brassica carinata HOM05D009622 ORTHO05D011757 2.3e-60 236.1 202 65.8
BolC1t01837H Brassica oleracea HOM05D009622 ORTHO05D011757 3.7e-58 228.8 194 69.1
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 3.7e-58 228.8 194 69.1
A01p15180 Brassica napus HOM05D009622 ORTHO05D011757 1.6e-53 213.4 180 70.0
BcaB03g12400 Brassica carinata HOM05D009622 ORTHO05D011757 7.9e-53 211.1 197 63.5
BcaC09g50936 Brassica carinata HOM05D009622 ORTHO05D011757 3.0e-52 209.1 180 69.4
C01p19110 Brassica napus HOM05D009622 ORTHO05D011757 3.0e-52 209.1 180 69.4
C03p80370 Brassica napus HOM05D009622 ORTHO05D011757 9.7e-51 204.1 199 61.8
BolC3t20285H Brassica oleracea HOM05D009622 ORTHO05D011757 9.7e-51 204.1 199 61.8
BcaC01g00479 Brassica carinata HOM05D009622 ORTHO05D011757 1.3e-50 203.8 199 61.3
A08p22040 Brassica napus HOM05D009622 ORTHO05D011757 3.1e-49 199.1 204 60.8
BraA08t34155Z Brassica rapa HOM05D009622 ORTHO05D011757 3.1e-49 199.1 204 60.8
BcaNung01094 Brassica carinata HOM05D009622 ORTHO05D011757 2.5e-46 189.5 180 65.6
Aa31LG6G7130 Aethionema arabicum HOM05D009622 ORTHO05D011757 1.0e-39 167.5 194 55.2
THA.LOC104807001 Tarenaya hassleriana HOM05D009622 ORTHO05D011757 2.1e-13 80.1 193 34.7
THA.LOC104815074 Tarenaya hassleriana HOM05D009622 ORTHO05D011757 1.9e-09 67.0 200 33.5
A06p33330 Brassica napus HOM05D011751 ORTHO05D016060 3.0e-07 59.7 64 57.8
BolC3t16916H Brassica oleracea HOM05D011751 ORTHO05D016060 8.6e-07 58.2 58 62.1
BcaNung06238 Brassica carinata HOM05D011751 ORTHO05D016060 2.5e-06 56.6 58 60.3
C03p54400 Brassica napus HOM05D011751 ORTHO05D016060 5.6e-06 55.5 58 58.6
C07p25110 Brassica napus HOM05D011751 ORTHO05D016060 5.6e-06 55.5 58 58.6
C08p27730 Brassica napus HOM05D011751 ORTHO05D016060 5.6e-06 55.5 58 58.6
C04p72000 Brassica napus HOM05D011751 ORTHO05D101175 9.5e-06 54.7 57 59.6


User provided reference genes

Program Settings