Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 3.3e-162 575.1 309 100.0
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 3.5e-148 528.5 309 91.9
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 3.2e-141 505.4 309 87.7
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 5.6e-138 494.6 314 85.4
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 7.6e-135 484.2 311 83.6
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.4e-134 481.1 311 83.3
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.4e-134 481.1 311 83.3
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.9e-133 479.6 313 83.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 1.9e-133 479.6 311 83.0
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.9e-133 479.6 311 83.9
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.3e-131 473.4 311 82.3
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 2.1e-113 412.9 307 74.3
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 2.1e-108 396.4 307 72.0
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 3.3e-82 309.3 276 64.1
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 4.3e-82 308.9 256 66.4
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 3.4e-79 299.3 183 86.9
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 2.9e-78 296.2 285 61.1
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 3.8e-78 295.8 256 64.8
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.7e-76 289.7 300 54.7
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.6e-76 289.3 278 60.8
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 3.6e-76 289.3 278 60.8
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 6.1e-76 288.5 251 62.5
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 7.9e-76 288.1 278 60.8
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 3.0e-75 286.2 295 58.0
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 5.1e-75 285.4 308 53.9
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 8.8e-75 284.6 258 59.3
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 8.8e-75 284.6 305 52.8
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 3.3e-74 282.7 257 59.9
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 3.3e-74 282.7 247 60.3
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 5.7e-74 282.0 264 59.1
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 7.4e-74 281.6 305 53.8
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 9.7e-74 281.2 268 59.7
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 2.8e-73 279.6 259 58.3
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 8.2e-73 278.1 253 60.1
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 4.1e-72 275.8 292 54.8
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 2.0e-71 273.5 252 59.9
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 4.5e-71 272.3 239 63.6
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 5.9e-71 271.9 267 58.1
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 7.7e-71 271.6 294 53.1
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 3.8e-70 269.2 306 51.0
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 3.8e-70 269.2 284 53.9
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.8e-70 269.2 238 59.7
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 1.5e-69 267.3 257 59.9
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 2.5e-69 266.5 268 57.8
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.5e-69 266.5 268 57.8
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 2.5e-69 266.5 307 49.8
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 7.2e-69 265.0 259 57.5
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 9.4e-69 264.6 308 52.3
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 9.4e-69 264.6 264 58.7
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 2.1e-68 263.5 268 54.9
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 6.1e-68 261.9 307 52.8
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.8e-67 260.4 256 55.9
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.8e-67 260.4 307 50.5
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 2.3e-67 260.0 284 56.3
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 2.3e-67 260.0 262 56.5
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 4.0e-67 259.2 283 53.0
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 5.2e-67 258.8 302 50.3
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.0e-66 256.9 241 58.1
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 2.0e-66 256.9 289 53.6
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 2.6e-66 256.5 280 52.5
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 3.3e-66 256.1 253 57.7
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 7.5e-66 255.0 319 49.2
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 9.7e-66 254.6 244 57.0
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 1.3e-65 254.2 245 58.0
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 2.2e-65 253.4 282 52.1
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 3.7e-65 252.7 295 50.5
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 3.7e-65 252.7 291 50.9
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 4.8e-65 252.3 238 58.4
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.8e-64 250.4 265 54.0
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 1.8e-64 250.4 252 56.7
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 2.4e-64 250.0 306 49.0
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 9.1e-64 248.1 270 52.6
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.7e-63 246.5 279 52.3
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 5.9e-63 245.4 253 55.3
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 1.0e-62 244.6 281 52.3
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 3.8e-62 242.7 250 54.8
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 3.2e-61 239.6 309 48.9
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 4.2e-61 239.2 278 51.1
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 9.4e-61 238.0 260 53.5
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 4.7e-60 235.7 238 53.8
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 8.0e-60 235.0 298 50.0
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.8e-59 233.8 250 54.4
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.8e-59 233.8 249 53.8
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 2.3e-59 233.4 300 50.3
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 2.3e-59 233.4 248 52.4
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 5.7e-58 228.8 265 52.5
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 9.8e-58 228.0 277 48.7
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 4.8e-57 225.7 291 48.1
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.4e-56 223.4 270 49.3
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 4.2e-53 212.6 262 51.5
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 8.0e-52 208.4 240 47.9
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 1.8e-51 207.2 269 49.1
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 3.4e-50 203.0 268 47.8
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 1.7e-49 200.7 268 47.4
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 2.2e-49 200.3 241 49.8
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 8.3e-49 198.4 256 47.3
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-48 198.0 251 47.4
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 7.3e-45 185.3 229 51.5
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 5.2e-43 179.1 136 72.8
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 2.6e-42 176.8 282 42.9
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 3.4e-42 176.4 262 48.9
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 3.5e-39 166.4 179 48.6
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 3.1e-35 153.3 150 64.0
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 1.5e-34 151.0 242 40.1
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 2.4e-32 143.7 217 40.6
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 4.1e-32 142.9 146 56.8
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.7e-31 140.2 247 37.7
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 3.9e-30 136.3 201 43.3
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.5e-29 134.4 279 36.9
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.6e-28 131.0 265 37.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 4.1e-24 116.3 116 57.8
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 5.4e-24 115.9 319 31.0
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 2.7e-23 113.6 139 43.9
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 5.1e-22 109.4 265 32.1
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 9.5e-21 105.1 240 36.7
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 8.1e-20 102.1 156 47.4
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 2.3e-19 100.5 280 30.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 4.6e-15 86.3 137 41.6
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 5.6e-13 79.3 253 30.8
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.9e-09 67.0 58 55.2
PRCOL_00003382 Prasinoderma coloniale HOM05D006904 ORTHO05D008439 3.0e-06 57.0 149 32.9


User provided reference genes

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