Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G28970 Arabidopsis lyrata HOM05D010278 ORTHO05D012429 1.4e-63 246.1 126 100.0
AT4G24275 Arabidopsis thaliana HOM05D010278 ORTHO05D012429 4.4e-49 198.0 127 84.3
Carub.0007s1677 Capsella rubella HOM05D010278 ORTHO05D012429 6.4e-40 167.5 127 76.4
CARHR231710 Cardamine hirsuta HOM05D010278 ORTHO05D012429 6.2e-35 151.0 129 74.4
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 6.4e-32 141.0 129 71.3
Thhalv10027403m.g Eutrema salsugineum HOM05D010278 ORTHO05D012429 1.4e-31 139.8 126 67.5
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 2.4e-31 139.0 128 70.3
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 3.2e-31 138.7 129 70.5
A01p15640 Brassica napus HOM05D010278 ORTHO05D012429 1.6e-30 136.3 129 66.7
BraA01t01502Z Brassica rapa HOM05D010278 ORTHO05D012429 2.1e-30 136.0 129 65.9
BcaNung05634 Brassica carinata HOM05D010278 ORTHO05D012429 4.6e-30 134.8 131 66.4
C01p19590 Brassica napus HOM05D010278 ORTHO05D012429 6.0e-30 134.4 129 65.9
BcaC09g50886 Brassica carinata HOM05D010278 ORTHO05D012429 7.8e-30 134.0 129 65.9
BolC1t01886H Brassica oleracea HOM05D010278 ORTHO05D012429 1.0e-29 133.7 129 65.9
BcaNung01136 Brassica carinata HOM05D010278 ORTHO05D012429 2.8e-27 125.6 129 64.3
A03p55240 Brassica napus HOM05D010278 ORTHO05D012429 3.6e-27 125.2 132 65.2
BraA03t14583Z Brassica rapa HOM05D010278 ORTHO05D012429 3.6e-27 125.2 132 65.2
Sp7g22270 Schrenkiella parvula HOM05D010278 ORTHO05D012429 1.7e-24 116.3 114 66.7
BcaNung05632 Brassica carinata HOM05D010278 ORTHO05D012429 8.4e-24 114.0 93 75.3
BcaNung05790 Brassica carinata HOM05D010278 ORTHO05D012429 8.4e-24 114.0 93 75.3
Aa31LG4G9400 Aethionema arabicum HOM05D010278 ORTHO05D012429 2.7e-14 82.4 120 52.5
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 1.2e-09 67.0 89 50.6
THA.LOC104809151 Tarenaya hassleriana HOM05D010278 ORTHO05D012429 2.0e-09 66.2 101 46.5
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 2.9e-08 62.4 140 40.0
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 8.4e-08 60.8 93 46.2
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 8.4e-08 60.8 90 43.3
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 1.9e-07 59.7 96 46.9
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 2.4e-07 59.3 99 46.5
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 7.1e-07 57.8 90 48.9
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 9.3e-07 57.4 89 42.7
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 1.2e-06 57.0 91 49.5
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.6e-06 56.6 99 45.5
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 2.7e-06 55.8 88 45.5
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 3.5e-06 55.5 119 42.9
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 7.9e-06 54.3 99 41.4
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 7.9e-06 54.3 94 45.7


User provided reference genes

Program Settings