Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 9.7e-250 866.3 424 100.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 3.2e-221 771.5 424 90.1
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.6e-172 609.8 409 76.0
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 2.7e-167 592.4 428 71.0
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 2.0e-162 576.2 419 71.4
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 5.3e-147 525.0 432 64.8
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 7.9e-143 511.1 441 63.3
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.4e-134 483.8 442 61.3
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 5.1e-134 481.9 434 61.8
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 2.6e-133 479.6 434 61.8
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 3.3e-133 479.2 443 61.4
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.0e-130 469.9 435 60.5
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.2e-111 407.5 426 51.6
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 5.2e-110 402.1 433 51.3
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 2.8e-108 396.4 432 49.8
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 2.4e-107 393.3 434 49.1
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 3.1e-107 392.9 431 51.5
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 4.5e-106 389.0 420 49.5
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 7.7e-106 388.3 448 47.5
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.0e-105 387.9 457 50.3
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.3e-105 387.5 432 48.6
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.3e-105 387.5 441 49.7
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 2.9e-105 386.3 442 48.6
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 2.1e-103 380.2 423 51.8
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.1e-103 380.2 425 49.9
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 6.8e-102 375.2 426 50.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 2.6e-101 373.2 434 48.6
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.3e-100 370.9 421 49.4
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 2.8e-100 369.8 436 47.7
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 2.8e-100 369.8 428 47.2
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 1.8e-99 367.1 431 47.1
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 5.4e-99 365.5 431 48.3
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.6e-98 364.0 419 50.4
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.7e-98 363.2 425 48.5
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 7.8e-98 361.7 432 48.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 2.9e-97 359.8 427 49.4
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 6.6e-97 358.6 411 48.7
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 6.6e-97 358.6 419 48.7
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 6.6e-97 358.6 419 48.7
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 4.3e-96 355.9 426 46.7
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 9.5e-96 354.8 465 45.4
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 3.6e-95 352.8 228 77.2
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.4e-93 345.9 431 46.4
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 9.8e-93 344.7 417 47.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.9e-92 342.4 423 46.1
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.9e-91 340.5 392 48.0
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 3.2e-91 339.7 419 46.8
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 4.1e-91 339.3 432 45.8
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 4.1e-91 339.3 427 46.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.0e-90 337.0 424 46.0
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 7.8e-90 335.1 435 45.3
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.3e-89 334.3 424 46.2
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.7e-89 334.0 466 42.5
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 1.1e-88 331.3 437 45.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.5e-88 330.1 437 47.4
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 3.3e-88 329.7 423 46.8
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.3e-88 329.7 417 46.0
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 5.6e-88 328.9 425 46.6
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 3.6e-87 326.2 434 44.5
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 4.7e-87 325.9 448 44.2
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 1.4e-86 324.3 444 44.6
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.3e-84 317.8 425 44.2
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 6.4e-84 315.5 420 44.5
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 6.4e-84 315.5 430 44.7
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 8.3e-84 315.1 433 45.5
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 2.4e-83 313.5 428 44.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 4.6e-82 309.3 418 45.0
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.7e-81 307.4 377 45.1
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 5.1e-81 305.8 419 43.9
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 6.6e-81 305.4 418 43.8
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 7.3e-80 302.0 160 90.0
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 4.7e-79 299.3 212 73.6
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 8.1e-79 298.5 440 43.4
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 8.1e-79 298.5 425 44.0
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 5.2e-78 295.8 421 41.8
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 1.2e-77 294.7 425 40.7
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.5e-77 294.3 415 45.1
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 2.2e-76 290.4 420 42.6
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 4.9e-76 289.3 405 45.7
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.4e-75 287.7 452 38.3
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 9.2e-75 285.0 427 42.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 8.6e-73 278.5 413 42.6
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 8.1e-71 271.9 420 38.8
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 9.9e-69 265.0 408 42.2
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.6e-66 257.7 537 34.6
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 3.9e-65 253.1 432 39.1
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 5.6e-64 249.2 247 51.4
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.1e-62 245.0 426 38.7
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 9.0e-62 241.9 214 56.5
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 4.2e-59 233.0 218 56.0
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 7.8e-58 228.8 213 55.4
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.3e-57 228.0 425 37.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.9e-57 226.5 446 34.1
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 5.1e-57 226.1 320 44.7
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 9.0e-54 215.3 210 52.4
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 9.3e-51 205.3 426 34.0
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.5e-48 197.2 177 54.2
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 9.6e-48 195.3 330 42.1
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 3.7e-47 193.4 318 44.0
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 4.0e-46 189.9 172 53.5
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 1.2e-45 188.3 409 33.3
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 3.2e-43 180.3 172 51.7
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 3.5e-42 176.8 204 44.1
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 3.0e-41 173.7 479 29.4
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 3.1e-38 163.7 125 63.2
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 3.1e-38 163.7 152 57.2
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 5.3e-38 162.9 152 56.6
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 6.5e-36 156.0 126 56.3
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.9e-35 154.5 262 42.0
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.5e-35 154.1 293 38.2
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.2e-35 153.7 190 44.7
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.2e-35 153.7 190 44.7
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 5.5e-35 152.9 152 57.2
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 2.1e-34 151.0 180 50.6
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 4.6e-34 149.8 181 48.6
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 6.1e-34 149.4 162 50.0
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.8e-33 147.9 170 47.1
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.2e-28 131.0 144 43.1
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 2.2e-28 131.0 133 54.9
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 2.9e-28 130.6 117 49.6
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 2.1e-26 124.4 294 35.0
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 3.9e-25 120.2 158 48.7
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 3.7e-23 113.6 335 30.4
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 4.8e-23 113.2 141 36.9
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-21 108.6 147 42.9
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.2e-21 108.6 174 43.7
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 6.5e-20 102.8 105 55.2
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 2.7e-18 97.4 152 40.1
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 6.1e-18 96.3 89 51.7
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 5.7e-16 89.7 252 33.7
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.5e-11 75.1 211 30.3
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.6e-10 71.6 130 38.5
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 1.5e-08 65.1 49 61.2
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.3e-07 62.0 72 43.1


User provided reference genes

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