Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.4e-122 442.2 227 100.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 5.1e-112 407.9 227 93.0
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.4e-106 389.8 228 90.4
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 5.1e-104 381.3 229 89.5
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 1.2e-100 370.2 237 84.8
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 2.1e-97 359.4 235 83.4
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 2.3e-96 355.9 233 82.8
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 3.0e-96 355.5 235 82.6
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 3.0e-96 355.5 234 82.9
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 3.0e-96 355.5 235 82.6
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 4.4e-92 341.7 235 79.1
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.4e-85 320.1 237 73.0
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 5.3e-85 318.2 241 72.6
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 2.5e-71 272.7 233 63.5
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.3e-70 270.4 233 63.5
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 3.1e-69 265.8 229 62.9
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 6.9e-69 264.6 233 63.1
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-68 262.7 226 61.1
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-68 262.7 229 61.6
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 3.4e-68 262.3 229 61.6
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.0e-67 260.8 198 69.2
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.3e-67 260.4 235 62.1
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.2e-67 259.6 225 61.8
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 6.5e-67 258.1 231 61.0
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 6.5e-67 258.1 231 61.0
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.1e-66 257.3 229 60.7
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.4e-66 256.9 229 61.1
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.4e-66 256.9 239 59.8
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.9e-66 256.5 220 62.7
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 5.5e-66 255.0 231 60.2
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 9.3e-66 254.2 222 62.2
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.2e-65 253.8 232 60.8
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.2e-65 253.8 226 62.4
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.1e-65 253.1 230 59.6
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 2.7e-65 252.7 186 69.9
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 6.1e-65 251.5 233 60.1
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.3e-64 250.4 229 60.3
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 2.3e-64 249.6 186 68.8
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 3.9e-64 248.8 233 58.4
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 6.7e-64 248.1 189 68.8
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 8.7e-64 247.7 231 58.9
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.1e-63 247.3 201 66.2
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.5e-63 246.9 189 66.7
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 1.9e-63 246.5 231 57.6
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.5e-63 246.1 220 62.3
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 3.3e-63 245.7 220 61.8
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 3.3e-63 245.7 188 66.5
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 7.4e-63 244.6 211 60.7
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 9.7e-63 244.2 186 66.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.3e-62 243.8 189 67.7
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 3.7e-62 242.3 200 63.5
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 4.8e-62 241.9 204 64.2
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 8.2e-62 241.1 194 64.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.1e-61 240.7 216 62.0
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 1.8e-61 240.0 171 73.1
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.4e-61 239.6 201 61.7
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 4.1e-61 238.8 226 58.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 4.1e-61 238.8 200 63.0
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 5.3e-61 238.4 197 64.0
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 5.3e-61 238.4 230 56.1
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 1.2e-60 237.3 232 56.9
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.0e-59 234.2 285 49.1
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 3.8e-59 232.3 184 64.1
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 5.5e-58 228.4 222 55.0
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.6e-57 226.9 237 54.4
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 2.7e-57 226.1 195 61.0
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 6.1e-57 224.9 218 57.3
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.0e-56 224.2 171 66.7
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 2.3e-56 223.0 189 61.9
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 5.1e-56 221.9 195 61.0
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.1e-55 220.7 193 61.7
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.5e-55 220.3 179 64.8
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 2.0e-55 219.9 197 57.9
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 3.3e-55 219.2 185 62.2
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 3.3e-55 219.2 189 61.4
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 5.7e-55 218.4 189 60.8
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.3e-54 217.2 179 63.1
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 2.2e-54 216.5 251 53.8
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.2e-54 216.5 222 52.7
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.8e-54 216.1 153 67.3
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 4.8e-54 215.3 176 64.2
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 8.2e-54 214.5 185 60.5
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.4e-53 213.0 188 60.1
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 3.1e-53 212.6 192 58.9
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.2e-52 210.7 216 55.6
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 5.0e-51 205.3 135 72.6
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 3.2e-50 202.6 229 51.1
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 2.1e-49 199.9 185 56.8
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 6.1e-49 198.4 137 67.9
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 3.8e-43 179.1 252 43.3
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 5.5e-42 175.3 149 62.4
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 6.1e-41 171.8 192 53.6
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.5e-36 156.0 167 52.1
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 1.0e-35 154.5 100 73.0
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 5.0e-35 152.1 100 70.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 1.3e-30 137.5 180 42.2
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 2.8e-30 136.3 112 65.2
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 4.8e-30 135.6 95 82.1
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.7e-27 127.1 122 59.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 1.2e-25 120.9 173 40.5
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 1.0e-24 117.9 119 59.7
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 9.1e-21 104.8 65 70.8
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 1.6e-20 104.0 99 62.6
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 7.7e-20 101.7 63 76.2
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 1.0e-16 91.3 108 46.3
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 7.0e-13 78.6 109 47.7
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 1.3e-11 74.3 106 47.2
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.5e-10 70.9 55 61.8
Aa31LG10G9070 Aethionema arabicum HOM05D007115 ORTHO05D008923 1.9e-10 70.5 89 56.2
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 3.3e-10 69.7 60 61.7
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 9.5e-10 68.2 73 52.1


User provided reference genes

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