Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.5e-170 602.8 313 100.0
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.3e-166 589.7 313 97.4
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 6.4e-166 587.4 313 97.1
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 6.0e-164 580.9 313 95.8
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 2.4e-160 568.9 313 93.6
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.3e-158 563.1 313 93.0
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.1e-154 550.1 313 91.7
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.9e-154 549.3 313 91.4
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.3e-154 548.5 314 91.4
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 2.8e-153 545.4 313 91.1
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.1e-152 543.5 314 90.8
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 3.1e-152 542.0 314 90.4
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 3.1e-152 542.0 314 90.4
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.1e-152 542.0 314 90.8
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 6.9e-152 540.8 314 90.4
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 2.2e-150 535.8 313 88.8
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.2e-150 535.8 313 90.1
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 2.5e-125 452.6 324 73.1
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 4.2e-125 451.8 310 74.8
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 9.4e-125 450.7 312 74.4
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 9.4e-125 450.7 328 71.6
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.2e-124 450.3 317 76.3
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.7e-124 448.4 312 74.0
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 6.1e-124 448.0 312 73.7
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 7.4e-122 441.0 331 71.9
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.8e-121 439.1 316 72.8
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 8.2e-121 437.6 315 72.7
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 8.2e-121 437.6 296 75.3
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 1.1e-120 437.2 278 78.8
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.4e-120 436.8 321 71.7
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.8e-120 436.4 324 70.7
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.8e-120 436.4 301 74.1
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 9.1e-120 434.1 304 73.4
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.2e-119 433.7 280 78.6
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.2e-119 433.7 325 71.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.5e-119 433.3 314 70.4
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.5e-119 433.3 325 70.5
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 3.4e-119 432.2 269 80.7
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.4e-119 432.2 269 80.7
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 4.5e-119 431.8 320 71.2
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 5.9e-119 431.4 302 73.8
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 5.9e-119 431.4 321 69.5
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 7.7e-119 431.0 287 75.3
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.7e-119 431.0 269 80.3
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.3e-118 430.3 268 79.1
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.3e-118 430.3 300 74.3
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.7e-118 429.9 319 69.6
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 1.7e-118 429.9 319 70.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.7e-118 429.9 299 73.2
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.7e-118 429.9 299 73.6
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 5.0e-118 428.3 288 74.3
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 5.0e-118 428.3 299 73.6
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 8.5e-118 427.6 298 72.8
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 8.5e-118 427.6 323 69.3
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 8.5e-118 427.6 272 77.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.1e-117 427.2 310 72.3
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.1e-117 427.2 310 71.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.9e-117 426.4 299 72.2
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 4.2e-117 425.2 318 69.8
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 5.5e-117 424.9 279 76.3
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.5e-117 424.9 317 72.2
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 5.5e-117 424.9 330 68.8
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.5e-117 424.9 290 75.2
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 7.2e-117 424.5 297 73.1
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 9.4e-117 424.1 322 68.9
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 9.4e-117 424.1 283 76.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 1.6e-116 423.3 307 70.7
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 2.1e-116 422.9 311 70.7
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.7e-116 422.5 282 76.6
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.7e-116 422.5 289 75.8
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 4.7e-116 421.8 313 70.3
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.1e-116 421.4 292 72.9
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 6.1e-116 421.4 305 70.5
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.4e-115 420.2 289 74.7
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.4e-115 420.2 280 76.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 3.9e-115 418.7 326 68.7
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 5.2e-115 418.3 311 69.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 6.7e-115 417.9 319 69.3
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.0e-114 416.4 318 69.8
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.6e-114 416.0 300 72.3
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.7e-113 413.3 321 68.8
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.3e-110 403.7 319 67.1
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 3.8e-110 402.1 315 66.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 5.5e-109 398.3 231 83.1
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 5.5e-109 398.3 231 83.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.1e-108 396.4 293 70.3
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.7e-108 396.0 258 76.0
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 3.6e-108 395.6 323 66.6
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 3.6e-108 395.6 325 65.2
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.1e-104 384.0 300 69.0
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 5.3e-104 381.7 288 70.1
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 3.5e-103 379.0 303 67.3
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.7e-102 376.7 272 69.1
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 6.1e-100 368.2 228 78.5
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.2e-98 364.0 235 74.0
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.0e-98 363.2 302 63.9
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 2.6e-98 362.8 290 64.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 3.4e-98 362.5 320 61.2
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 6.3e-97 358.2 231 76.2
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 7.0e-96 354.8 271 65.3
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 4.5e-95 352.1 277 64.6
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 2.1e-92 343.2 316 58.5
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.3e-91 339.7 260 65.0
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 7.5e-90 334.7 207 79.7
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.8e-86 322.4 266 59.8
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 6.1e-84 315.1 246 64.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.6e-82 309.7 321 55.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 4.0e-75 285.8 284 54.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.9e-62 242.7 223 62.3
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 1.9e-61 240.4 297 49.8
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.8e-60 236.5 223 57.0
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.2e-55 221.1 230 55.7
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 4.6e-55 219.2 165 70.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 7.1e-48 195.3 156 67.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.7e-39 166.8 104 71.2
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 8.7e-22 108.6 69 72.5
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 8.2e-20 102.1 74 66.2
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.7e-10 68.9 64 64.1
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 6.5e-09 65.9 60 58.3
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 3.6e-07 60.1 125 31.2
C07p53990 Brassica napus HOM05D050604 ORTHO05D033303 3.9e-06 56.6 63 55.6
BolC7t45888H Brassica oleracea HOM05D050604 ORTHO05D033303 3.9e-06 56.6 63 55.6


User provided reference genes

Program Settings