Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.5e-123 444.9 215 100.0
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.8e-111 406.0 208 91.8
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.2e-109 399.1 198 95.5
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 6.5e-109 397.5 198 96.0
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 4.2e-108 394.8 201 93.5
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 9.7e-105 383.6 198 91.4
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.4e-103 379.8 200 90.0
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.0e-101 373.6 200 89.5
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.0e-101 373.6 200 89.5
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 1.2e-99 366.7 202 86.6
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.2e-99 366.7 201 87.6
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 7.9e-91 337.4 198 82.3
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 2.3e-74 282.7 197 65.5
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 5.7e-73 278.1 197 65.0
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.8e-73 277.3 197 64.5
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 9.8e-73 277.3 197 64.5
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 6.3e-72 274.6 197 66.0
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.4e-71 273.5 192 64.6
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 1.8e-71 273.1 198 66.7
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.8e-71 273.1 197 68.0
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.4e-71 272.7 204 63.7
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 7.0e-71 271.2 200 65.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.6e-70 270.0 209 62.2
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.0e-70 269.6 200 64.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.9e-70 268.1 198 64.1
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 5.9e-70 268.1 196 66.3
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 7.7e-70 267.7 200 64.0
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.0e-69 267.3 197 64.0
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.3e-69 266.9 197 62.9
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.3e-69 266.9 196 63.8
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 1.7e-69 266.5 210 61.4
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.1e-68 263.8 197 65.0
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.5e-68 263.5 210 59.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.9e-68 263.1 197 64.0
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.9e-68 263.1 202 62.9
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 3.2e-68 262.3 197 63.5
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 3.2e-68 262.3 198 64.1
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.2e-68 261.9 203 62.1
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 7.2e-68 261.2 198 63.6
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 7.2e-68 261.2 201 62.2
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.6e-67 260.0 200 62.5
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.6e-67 260.0 199 61.3
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.1e-67 259.6 197 62.9
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.1e-67 259.6 237 54.4
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.6e-67 258.8 198 61.6
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.7e-67 258.5 197 61.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.7e-67 258.5 195 62.6
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 8.0e-67 257.7 198 61.1
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 8.0e-67 257.7 197 61.4
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.0e-67 257.7 197 61.4
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.0e-66 257.3 201 61.7
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.4e-66 256.9 197 64.0
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.4e-66 256.9 205 60.0
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.4e-66 256.9 197 62.4
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.8e-66 256.5 200 62.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 2.0e-65 253.1 197 61.4
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 7.5e-65 251.1 198 60.1
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.8e-65 250.8 185 61.6
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 1.7e-64 250.0 197 62.9
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 2.2e-64 249.6 213 59.2
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.2e-64 249.6 197 61.9
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.8e-64 249.2 197 60.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.8e-64 249.2 197 62.9
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 3.7e-64 248.8 197 58.9
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 3.7e-64 248.8 197 62.9
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 4.9e-64 248.4 198 60.6
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 1.4e-63 246.9 197 60.4
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 1.4e-63 246.9 197 59.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 7.0e-63 244.6 206 56.3
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 7.7e-62 241.1 219 54.8
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 1.7e-61 240.0 192 59.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 1.7e-61 240.0 195 60.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.3e-61 239.6 199 59.8
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 5.0e-61 238.4 197 59.4
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 2.5e-60 236.1 177 63.3
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 7.3e-60 234.6 197 57.9
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 9.5e-60 234.2 164 70.1
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.8e-58 229.9 197 57.4
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 3.0e-58 229.2 198 58.1
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 2.0e-57 226.5 199 51.8
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 4.4e-57 225.3 200 56.5
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 4.4e-57 225.3 197 56.3
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 4.9e-56 221.9 188 57.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.1e-55 220.7 228 51.8
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.5e-52 210.3 132 66.7
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.3e-50 203.0 140 64.3
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.7e-48 196.8 204 50.5
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 2.2e-48 196.4 164 56.1
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.7e-48 195.7 172 55.2
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 8.3e-48 194.5 189 52.9
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 2.8e-43 179.5 148 57.4
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.1e-42 176.0 212 47.6
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 3.7e-40 169.1 163 52.8
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.7e-37 160.2 150 58.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.6e-36 155.2 167 50.9
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.0e-33 146.7 135 51.1
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-30 136.3 138 47.1
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.0e-29 134.4 107 56.1
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 4.4e-25 119.0 132 47.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 6.0e-22 108.6 162 36.4
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 1.3e-21 107.5 67 68.7
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 5.1e-21 105.5 100 58.0
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 2.1e-19 100.1 166 38.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.6e-19 99.4 88 63.6
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 1.1e-18 97.8 54 79.6
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.4e-18 96.7 166 34.3
C01p22040 Brassica napus HOM05D006529 ORTHO05D008380 2.6e-17 93.2 58 77.6
BolC1t02133H Brassica oleracea HOM05D006529 ORTHO05D008380 2.6e-17 93.2 58 77.6
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.3e-15 84.7 77 57.1
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 5.1e-13 79.0 49 67.3
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 6.9e-10 68.6 88 48.9
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 9.0e-10 68.2 201 28.4
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 4.9e-08 62.4 41 58.5
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.1e-07 61.2 44 65.9
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.4e-07 60.8 77 50.6
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 5.5e-07 58.9 35 68.6
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 9.3e-07 58.2 28 82.1


User provided reference genes

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