Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.7e-152 542.0 271 100.0
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 2.0e-147 525.8 271 96.3
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 9.0e-132 473.8 271 88.9
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 1.1e-124 450.3 271 86.3
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 2.2e-122 442.6 268 84.3
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 3.8e-122 441.8 269 85.5
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 3.9e-119 431.8 271 82.7
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 2.8e-117 425.6 271 80.8
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 2.8e-117 425.6 271 80.8
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.5e-115 419.9 271 80.4
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.5e-115 419.9 271 80.4
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 5.3e-108 394.8 272 78.7
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 9.1e-68 261.2 280 58.6
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 2.0e-46 190.3 296 43.2
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.3e-45 187.6 302 43.0
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.4e-44 184.1 286 42.0
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.9e-44 183.7 292 44.2
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.9e-44 183.7 286 42.0
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.9e-44 183.7 286 42.0
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.9e-44 183.7 288 46.2
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 1.9e-44 183.7 271 45.4
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 3.2e-44 183.0 262 47.3
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 5.4e-44 182.2 291 42.3
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 9.2e-44 181.4 301 44.2
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 9.2e-44 181.4 290 44.1
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 1.2e-43 181.0 262 46.6
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 1.2e-43 181.0 282 46.1
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.2e-43 181.0 297 44.4
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.0e-43 180.3 262 46.9
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 7.8e-43 178.3 292 44.5
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.7e-42 177.2 262 46.6
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 3.9e-42 176.0 297 45.8
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 2.5e-41 173.3 288 43.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 9.5e-41 171.4 296 41.9
C01p22270 Brassica napus HOM05D007298 ORTHO05D009226 6.2e-40 168.7 110 81.8
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 1.4e-39 167.5 272 42.6
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 5.2e-39 165.6 273 41.4
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 8.9e-39 164.9 266 43.2
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 1.5e-38 164.1 268 43.3
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 3.4e-38 162.9 311 41.5
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 3.4e-38 162.9 284 40.1
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 4.4e-38 162.5 280 41.8
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.9e-37 159.1 259 42.1
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 6.4e-37 158.7 258 42.6
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 6.4e-37 158.7 249 41.8
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 8.3e-37 158.3 262 42.4
BcaC01g06536 Brassica carinata HOM05D007298 ORTHO05D009226 1.4e-36 157.5 100 79.0
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 1.9e-36 157.1 281 39.9
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 4.1e-36 156.0 259 42.1
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 9.2e-36 154.8 287 40.4
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.2e-35 154.5 299 42.1
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.6e-35 154.1 259 41.7
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 1.6e-35 154.1 288 40.6
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.6e-35 154.1 283 40.3
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 3.5e-35 152.9 206 49.0
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 3.5e-35 152.9 206 49.0
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 7.8e-35 151.8 241 42.3
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.0e-34 151.4 279 40.5
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 3.0e-34 149.8 271 41.7
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 6.6e-34 148.7 274 42.3
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 8.6e-34 148.3 278 39.9
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.1e-33 147.9 244 44.7
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.5e-33 147.5 241 42.7
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 2.5e-33 146.7 298 40.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 3.3e-33 146.4 241 43.6
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 4.3e-33 146.0 272 41.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 5.6e-33 145.6 291 38.8
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 9.5e-33 144.8 233 42.9
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 9.5e-33 144.8 254 39.8
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 9.5e-33 144.8 232 43.5
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 2.1e-32 143.7 235 43.0
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.8e-32 143.3 237 42.6
C01p22230 Brassica napus HOM05D007298 ORTHO05D009226 4.7e-32 142.5 112 70.5
BolC1t02153H Brassica oleracea HOM05D007298 ORTHO05D009226 4.7e-32 142.5 112 70.5
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 4.7e-32 142.5 284 40.1
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 8.1e-32 141.7 279 39.1
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.4e-31 141.0 251 42.2
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 1.8e-31 140.6 240 40.0
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 1.8e-31 140.6 277 39.4
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 6.8e-31 138.7 281 38.4
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 6.8e-31 138.7 213 44.1
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 8.9e-31 138.3 303 37.0
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 1.5e-30 137.5 188 48.4
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.0e-30 137.1 247 43.3
BcaC09g50696 Brassica carinata HOM05D007298 ORTHO05D009226 5.8e-30 135.6 107 70.1
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 9.9e-30 134.8 259 40.2
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 9.9e-30 134.8 224 44.6
BcaC09g50700 Brassica carinata HOM05D007298 ORTHO05D009226 1.3e-29 134.4 79 84.8
BolC1t02157H Brassica oleracea HOM05D007298 ORTHO05D009226 1.3e-29 134.4 79 84.8
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 4.9e-29 132.5 252 40.5
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 4.9e-29 132.5 252 40.5
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 4.9e-29 132.5 269 38.7
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 1.1e-28 131.3 210 47.1
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 1.1e-28 131.3 225 42.2
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.9e-28 130.6 215 41.4
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 1.6e-27 127.5 195 43.1
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 2.1e-27 127.1 218 39.4
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 2.7e-27 126.7 199 43.2
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 6.6e-26 122.1 298 38.3
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 2.5e-25 120.2 217 42.9
BolC3t13782H Brassica oleracea HOM05D007298 ORTHO05D009226 2.4e-23 113.6 63 84.1
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.3e-21 107.8 203 37.4
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.3e-21 107.8 203 37.4
BraA01t01717Z Brassica rapa HOM05D007298 ORTHO05D009226 6.4e-21 105.5 64 82.8
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 6.4e-21 105.5 219 37.4
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 4.2e-20 102.8 320 30.6
A01p17630 Brassica napus HOM05D007298 ORTHO05D009226 5.4e-20 102.4 64 79.7
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 7.1e-20 102.1 227 37.4
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 1.5e-17 94.4 131 48.1
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.4e-12 77.0 220 33.2
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 7.1e-12 75.5 118 40.7


User provided reference genes

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