Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 0.0e+00 1340.1 719 100.0
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 0.0e+00 1176.8 721 89.9
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 0.0e+00 1115.5 721 85.7
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 0.0e+00 1075.5 722 82.3
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 2.4e-309 1065.1 727 81.6
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 1.9e-293 1012.3 731 77.4
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 2.8e-273 945.3 730 75.1
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 2.8e-273 945.3 730 75.1
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 4.3e-266 921.4 728 72.5
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 4.3e-266 921.4 728 72.5
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 9.6e-258 893.6 740 73.5
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 8.4e-246 854.0 728 70.9
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 1.6e-244 849.7 730 71.2
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 1.6e-244 849.7 730 71.2
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 1.0e-243 847.0 730 71.4
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 1.3e-241 840.1 743 67.3
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 1.0e-235 820.5 728 70.2
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 2.0e-202 709.9 754 57.0
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.4e-195 687.2 759 56.7
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 1.2e-111 408.3 852 38.1
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 5.0e-97 359.8 803 37.2
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 6.1e-95 352.8 775 37.4
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 5.7e-93 346.3 797 37.5
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 1.1e-91 342.0 796 37.1
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 1.4e-91 341.7 771 37.2
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.8e-91 341.3 796 36.8
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 1.6e-90 338.2 776 37.5
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 6.5e-89 332.8 783 36.0
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 5.5e-88 329.7 785 36.1
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 4.0e-86 323.6 781 35.9
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 6.8e-86 322.8 796 35.9
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 5.4e-83 313.2 783 34.7
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.6e-82 311.6 777 35.8
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 3.5e-82 310.5 772 36.4
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 3.6e-79 300.4 794 38.4
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 4.0e-78 297.0 768 35.0
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 6.8e-78 296.2 771 34.6
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 1.5e-77 295.0 800 37.4
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 2.2e-76 291.2 759 34.8
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 6.4e-76 289.7 770 34.3
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.4e-75 288.5 852 32.7
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 2.4e-75 287.7 789 34.3
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 2.4e-75 287.7 791 33.8
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 3.9e-73 280.4 783 33.3
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 9.5e-72 275.8 772 32.5
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 1.2e-71 275.4 795 35.7
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 1.6e-71 275.0 783 32.3
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 2.8e-71 274.2 782 32.6
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 1.8e-70 271.6 779 32.0
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 5.2e-70 270.0 768 31.9
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 6.8e-70 269.6 768 32.0
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.2e-69 268.9 793 33.5
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 8.3e-68 262.7 804 32.5
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.4e-67 261.9 794 33.5
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 1.2e-66 258.8 766 31.3
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 6.0e-66 256.5 774 32.7
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 5.0e-65 253.4 818 32.3
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.1e-64 252.3 779 34.8
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.5e-64 251.1 798 34.6
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 3.3e-64 250.8 730 31.1
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 2.1e-63 248.1 799 34.3
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 4.7e-63 246.9 803 34.4
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 4.7e-63 246.9 785 33.8
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 2.3e-62 244.6 805 32.7
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 6.8e-62 243.0 802 34.0
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.9e-60 237.7 770 32.6
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 1.5e-56 225.3 794 29.8
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 2.5e-56 224.6 776 30.9
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 5.6e-56 223.4 935 28.9
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 7.3e-56 223.0 920 28.6
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.2e-55 222.2 783 33.0
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 3.6e-55 220.7 789 32.6
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 6.0e-50 203.4 731 30.6
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.7e-49 201.8 784 29.6
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 2.3e-49 201.4 776 29.5
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 1.5e-48 198.7 779 29.4
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.1e-46 192.6 752 29.5
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.4e-46 192.2 749 28.8
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 8.9e-46 189.5 753 29.7
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 1.2e-45 189.1 782 30.3
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 1.5e-45 188.7 785 30.4
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 1.3e-44 185.7 774 29.1
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 6.4e-44 183.3 755 29.0
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 1.1e-43 182.6 785 29.3
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 7.8e-42 176.4 781 30.1
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 6.6e-41 173.3 716 30.9
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 7.3e-40 169.9 715 30.5
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 1.6e-39 168.7 734 28.3
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 2.1e-39 168.3 760 28.6
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 2.1e-39 168.3 789 28.3
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.8e-39 167.9 744 29.3
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 4.8e-39 167.2 793 28.9
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 2.4e-38 164.9 787 28.3
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 5.3e-38 163.7 747 28.2
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 4.5e-37 160.6 755 28.2
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 3.8e-36 157.5 744 28.6
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 3.8e-36 157.5 754 28.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 6.4e-36 156.8 708 29.7
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 2.4e-35 154.8 306 39.2
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 3.2e-35 154.5 726 28.0
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.2e-34 152.5 726 28.7
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 1.6e-34 152.1 802 28.1
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 3.9e-33 147.5 698 28.8
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 2.8e-31 141.4 769 28.7
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 3.6e-31 141.0 697 28.8
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 9.0e-30 136.3 794 28.7
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 9.0e-30 136.3 766 26.1
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 2.6e-29 134.8 778 27.9
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 4.5e-29 134.0 716 27.2
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 2.2e-28 131.7 776 27.4
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 4.2e-27 127.5 684 27.9
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.2e-26 125.9 674 28.0
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.7e-26 124.8 792 28.0
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 2.1e-23 115.2 574 26.8
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 3.7e-23 114.4 783 25.7
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 1.1e-22 112.8 760 25.3
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 7.1e-19 100.1 743 27.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 2.3e-17 95.1 698 28.4
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 3.4e-13 81.3 697 24.4
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 2.2e-12 78.6 736 24.5
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.2e-12 78.6 708 25.8
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 2.2e-12 78.6 169 36.7
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 4.2e-11 74.3 740 25.9
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.2e-10 72.8 698 26.4
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 7.4e-08 63.5 663 25.2
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 7.4e-08 63.5 706 24.5
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 1.6e-07 62.4 197 29.9
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 4.8e-07 60.8 45 62.2
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 4.8e-07 60.8 648 24.7
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 6.9e-06 57.0 136 33.8


User provided reference genes

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