Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.8e-93 344.7 166 100.0
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.7e-88 328.2 168 95.2
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.3e-80 303.1 170 85.3
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 6.4e-80 300.8 172 86.6
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.2e-67 260.0 167 79.0
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.8e-67 258.8 167 77.2
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 3.6e-67 258.5 169 79.3
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.8e-66 256.1 172 75.6
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 1.5e-65 253.1 169 76.9
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 4.4e-65 251.5 173 72.3
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.3e-64 250.0 173 74.6
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 6.6e-61 237.7 164 71.3
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 5.2e-58 228.0 167 71.3
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 5.2e-58 228.0 161 72.7
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-57 226.9 181 65.7
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-54 216.5 167 65.9
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 3.5e-54 215.3 176 65.3
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 4.6e-54 214.9 167 65.3
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 4.6e-54 214.9 167 65.3
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-53 212.6 165 66.7
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 3.3e-52 208.8 174 64.4
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 3.3e-52 208.8 176 65.3
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.3e-51 206.8 186 62.9
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 2.8e-51 205.7 175 64.0
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 2.8e-51 205.7 174 63.8
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 2.8e-51 205.7 175 64.0
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 3.6e-51 205.3 183 63.9
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 3.6e-51 205.3 186 62.4
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 3.6e-51 205.3 176 63.6
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 6.2e-51 204.5 183 63.4
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 8.1e-51 204.1 176 64.2
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 8.1e-51 204.1 176 64.2
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 8.1e-51 204.1 176 64.2
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 8.1e-51 204.1 176 64.2
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 8.1e-51 204.1 182 63.7
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-50 203.8 174 63.2
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 1.4e-50 203.4 186 61.8
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 2.4e-50 202.6 176 63.1
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 3.1e-50 202.2 174 63.2
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 3.1e-50 202.2 174 63.2
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 3.1e-50 202.2 176 62.5
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-49 200.3 176 63.1
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.2e-49 200.3 167 63.5
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 1.5e-49 199.9 179 62.0
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-49 199.1 199 55.8
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 9.9e-49 197.2 169 60.9
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 3.8e-48 195.3 176 61.9
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 4.9e-48 194.9 183 61.7
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-48 194.5 179 60.3
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 6.4e-48 194.5 185 60.5
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 8.4e-48 194.1 179 62.0
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 8.4e-48 194.1 179 62.0
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 8.4e-48 194.1 179 62.0
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.4e-47 193.4 160 62.5
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 4.2e-47 191.8 173 61.3
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 4.2e-47 191.8 173 61.3
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 7.1e-47 191.0 188 58.5
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 7.1e-47 191.0 188 58.5
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 7.1e-47 191.0 188 58.5
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 7.1e-47 191.0 188 58.5
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.2e-46 190.3 129 76.7
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 4.6e-46 188.3 194 54.6
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 4.6e-46 188.3 201 54.7
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 7.8e-46 187.6 179 60.3
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 6.6e-45 184.5 173 59.5
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 2.5e-44 182.6 185 58.4
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 2.4e-42 176.0 173 58.4
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.2e-40 169.5 181 51.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 7.1e-39 164.5 134 67.9
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 2.7e-38 162.5 165 55.8
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 2.3e-37 159.5 164 52.4
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 4.3e-36 155.2 165 53.3
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.1e-35 152.9 163 53.4
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.8e-35 152.5 159 51.6
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.7e-35 152.1 155 53.5
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.5e-33 145.2 159 50.3
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-32 143.3 159 50.3
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-32 143.3 159 50.3
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.7e-32 143.3 159 50.3
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-32 142.5 159 48.4
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-32 142.5 157 48.4
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.5e-30 135.6 154 46.8
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.8e-27 125.9 154 44.8
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 2.9e-24 115.9 134 54.5
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 5.0e-24 115.2 95 60.0
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 6.5e-24 114.8 158 43.0
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 8.4e-24 114.4 95 60.0
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.0e-21 107.5 139 42.4
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.1e-20 104.0 159 42.1
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 5.7e-20 101.7 158 39.2
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.3e-19 100.5 164 39.0
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-19 100.1 164 39.0
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 4.8e-19 98.6 165 38.2
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 6.3e-19 98.2 152 40.1
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 3.8e-16 89.0 62 77.4
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 1.9e-15 86.7 77 58.4
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 6.1e-14 81.6 74 58.1
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 7.9e-14 81.3 62 71.0
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 1.4e-13 80.5 162 35.8
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 3.9e-13 79.0 153 34.6
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 3.3e-12 75.9 162 35.2
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 4.8e-11 72.0 147 29.9
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.1e-10 70.9 146 34.2
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 4.1e-10 68.9 124 33.9
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 6.9e-10 68.2 146 32.9
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 1.5e-09 67.0 130 33.8
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 4.5e-09 65.5 147 30.6
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.9e-09 65.1 153 34.0
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.0e-08 64.3 157 29.9
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.0e-08 64.3 157 27.4
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 2.2e-08 63.2 152 33.6
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 3.8e-08 62.4 151 31.8
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 5.0e-08 62.0 151 31.1
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 5.0e-08 62.0 158 32.3
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 5.0e-08 62.0 151 32.5
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 1.9e-07 60.1 148 34.5
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.5e-07 59.7 146 34.2
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 3.2e-07 59.3 145 31.0
Nitab4.5_0003461g0020 Nicotiana tabacum HOM05D003749 ORTHO05D004421 3.2e-07 59.3 152 31.6
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.2e-07 59.3 114 36.0
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 4.2e-07 58.9 145 26.9
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 4.2e-07 58.9 147 32.0
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 5.5e-07 58.5 126 31.0
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 5.5e-07 58.5 164 30.5
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 1.2e-06 57.4 151 31.8
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 1.2e-06 57.4 116 33.6
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 1.6e-06 57.0 123 32.5
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 2.1e-06 56.6 152 30.9
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 2.1e-06 56.6 150 28.7
COL.COLO4_09580 Corchorus olitorius HOM05D015826 ORTHO05D005877 3.6e-06 55.8 153 26.8
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 3.6e-06 55.8 150 29.3
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 4.7e-06 55.5 139 31.7
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 4.7e-06 55.5 148 31.1


User provided reference genes

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