Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 1.2e-82 312.0 160 100.0
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 5.1e-62 243.4 156 82.1
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 4.4e-61 240.4 165 80.0
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 3.7e-52 210.7 160 72.5
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 5.3e-51 206.8 167 70.7
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 7.2e-48 196.4 125 80.0
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 1.5e-45 188.7 156 65.4
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 2.0e-45 188.3 156 64.7
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.3e-45 187.6 168 64.9
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 4.4e-45 187.2 156 66.0
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-44 184.9 168 62.5
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 4.8e-44 183.7 156 64.7
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-39 168.7 158 62.7
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.7e-39 167.2 174 59.8
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.7e-39 167.2 174 59.8
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.1e-39 166.8 173 59.5
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.4e-38 165.6 173 59.0
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.0e-38 164.1 126 65.9
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 7.5e-37 159.8 140 59.3
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.8e-35 155.2 148 60.8
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-33 149.1 167 55.1
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-33 149.1 130 62.3
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-33 149.1 130 62.3
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-33 149.1 167 55.1
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.7e-33 148.7 137 60.6
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.2e-32 143.3 113 64.6
Aa31sc233G10 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.3e-28 129.8 170 50.6
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 7.3e-24 116.7 132 48.5
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 4.0e-22 110.9 140 47.9
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 1.3e-20 105.9 140 46.4
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.3e-20 105.9 140 45.7
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.7e-20 105.5 132 46.2
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 1.7e-20 105.5 129 46.5
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 2.9e-20 104.8 124 47.6
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.8e-19 102.1 140 44.3
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 1.2e-18 99.4 128 42.2
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.7e-18 98.2 131 41.2
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 3.5e-18 97.8 117 46.2
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 3.5e-18 97.8 128 41.4
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 6.0e-18 97.1 140 43.6
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 7.8e-18 96.7 118 46.6
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 1.0e-17 96.3 147 37.4
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.0e-17 96.3 130 42.3
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.0e-17 96.3 128 41.4
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 1.7e-17 95.5 130 42.3
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 2.3e-17 95.1 131 40.5
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 3.0e-17 94.7 125 41.6
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 5.0e-17 94.0 125 42.4
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 8.6e-17 93.2 125 41.6
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 8.6e-17 93.2 125 41.6
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 8.6e-17 93.2 130 41.5
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.1e-16 92.8 131 38.9
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 1.1e-16 92.8 124 42.7
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 1.9e-16 92.0 105 46.7
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 4.3e-16 90.9 125 40.8
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 5.6e-16 90.5 122 40.2
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 7.3e-16 90.1 114 44.7
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 1.6e-15 89.0 125 39.2
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.8e-15 88.2 117 42.7
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 6.2e-15 87.0 125 36.8
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.0e-15 86.7 119 47.1
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.1e-14 86.3 118 42.4
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.3e-14 85.1 117 41.0
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 2.6e-13 81.6 122 36.9
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 9.8e-13 79.7 125 37.6
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 1.3e-12 79.3 109 40.4
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 1.7e-12 79.0 141 34.8
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 2.2e-12 78.6 70 58.6
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 2.9e-12 78.2 131 37.4
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 2.9e-12 78.2 127 37.0
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 3.7e-12 77.8 117 36.8
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 6.4e-12 77.0 118 37.3
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 6.4e-12 77.0 103 39.8
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.4e-11 75.9 166 33.7
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 2.4e-11 75.1 108 39.8
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 2.4e-11 75.1 149 35.6
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 7.0e-11 73.6 114 37.7
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 7.0e-11 73.6 99 48.5
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 4.6e-10 70.9 146 32.2
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 3.0e-09 68.2 140 32.9
ATR0697G204 Amborella trichopoda HOM05D006694 ORTHO05D008240 5.0e-09 67.4 119 35.3
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 5.0e-09 67.4 128 34.4
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 6.6e-09 67.0 104 37.5
BcaB02g10473 Brassica carinata HOM05D012099 ORTHO05D014504 8.6e-09 66.6 52 63.5
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 1.1e-08 66.2 118 32.2
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 1.5e-08 65.9 122 34.4
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 1.2e-07 62.8 84 44.0
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.2e-07 62.8 122 31.1
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 1.2e-07 62.8 63 52.4
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 1.6e-07 62.4 73 46.6
BolC2t07316H Brassica oleracea HOM05D012099 ORTHO05D014504 8.1e-07 60.1 36 77.8
BolC9t53522H Brassica oleracea HOM05D012099 ORTHO05D014504 8.1e-07 60.1 36 77.8
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 1.1e-06 59.7 86 32.6
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 5.2e-06 57.4 120 30.8
C03p32380 Brassica napus HOM05D012099 ORTHO05D014504 5.2e-06 57.4 36 75.0
C07p23600 Brassica napus HOM05D012099 ORTHO05D014504 5.2e-06 57.4 36 75.0
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.8e-06 57.0 119 26.9


User provided reference genes

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