Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 6.1e-197 690.6 352 100.0
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 2.9e-183 645.2 349 93.7
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 2.0e-176 622.5 351 90.9
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 6.1e-173 610.9 352 88.9
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 4.0e-172 608.2 341 90.0
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.7e-172 607.4 348 89.9
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 8.8e-172 607.1 341 89.7
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 3.8e-167 591.7 341 88.0
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 1.5e-166 589.7 341 87.7
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 4.2e-166 588.2 341 87.4
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.5e-152 542.0 309 88.3
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.5e-150 536.6 350 77.4
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.6e-141 506.5 260 96.2
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.0e-131 473.0 359 69.6
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.1e-125 453.0 381 59.6
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 2.7e-120 436.0 370 60.0
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.6e-120 435.3 394 57.6
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.7e-119 433.3 379 58.8
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 3.9e-119 432.2 403 56.1
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.5e-118 430.3 362 60.5
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 1.5e-118 430.3 362 60.5
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.3e-118 429.1 385 59.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 5.6e-118 428.3 360 59.2
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 5.6e-118 428.3 356 60.7
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 9.6e-118 427.6 361 60.7
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 2.8e-117 426.0 368 58.4
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 3.6e-117 425.6 356 62.6
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 4.7e-117 425.2 360 60.8
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 6.2e-117 424.9 361 59.8
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.4e-116 423.7 368 59.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 3.1e-116 422.5 369 57.5
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.1e-116 422.5 355 61.1
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 4.0e-116 422.2 363 60.1
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.2e-115 420.6 382 56.0
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.2e-115 420.6 362 60.2
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 1.3e-114 417.2 388 56.4
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.3e-114 417.2 361 59.3
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.7e-114 416.8 372 58.1
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.2e-114 416.4 362 59.4
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 3.8e-114 415.6 350 61.4
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 1.1e-113 414.1 362 58.3
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.1e-113 414.1 366 58.5
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 3.2e-113 412.5 362 58.3
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.2e-113 412.5 360 56.7
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 3.2e-113 412.5 371 57.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.4e-113 411.8 375 57.1
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.2e-112 410.6 368 54.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 2.7e-112 409.5 325 63.1
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 4.6e-112 408.7 360 58.1
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 6.0e-112 408.3 378 56.6
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 2.3e-111 406.4 350 58.0
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 5.1e-111 405.2 400 54.2
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.3e-110 402.5 360 55.3
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 4.3e-110 402.1 349 59.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 9.6e-110 401.0 309 66.3
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-109 400.6 360 55.3
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 2.8e-109 399.4 373 55.2
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 3.6e-109 399.1 365 58.4
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 6.2e-109 398.3 304 66.4
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.4e-108 397.1 372 54.6
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 1.8e-108 396.7 350 59.1
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 6.9e-108 394.8 358 55.3
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 9.0e-108 394.4 362 56.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 9.0e-108 394.4 385 52.5
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 9.0e-108 394.4 355 58.3
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 2.0e-107 393.3 352 58.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.4e-107 392.1 372 53.5
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.8e-107 391.7 382 55.0
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.3e-106 390.6 359 55.7
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.3e-106 390.6 329 59.0
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.7e-106 390.2 350 58.6
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 2.2e-106 389.8 352 58.0
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.4e-105 386.3 355 53.8
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 3.2e-105 386.0 381 52.0
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 9.3e-105 384.4 373 55.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.6e-104 383.6 439 49.0
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 3.3e-102 375.9 367 55.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.3e-102 375.9 341 58.1
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 7.4e-102 374.8 363 53.2
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 9.6e-102 374.4 340 58.5
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 1.1e-97 360.9 283 63.6
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.9e-97 360.1 324 56.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.2e-97 359.0 279 65.2
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 9.3e-97 357.8 366 51.4
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 2.7e-96 356.3 381 51.2
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 5.6e-94 348.6 289 61.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.4e-92 343.2 271 63.1
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 8.4e-90 334.7 264 63.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 4.2e-89 332.4 359 52.4
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 4.6e-88 328.9 338 51.8
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.0e-87 327.8 333 52.6
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.8e-87 327.0 416 45.2
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 5.1e-87 325.5 232 67.2
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.9e-86 323.6 356 49.4
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 5.7e-86 322.0 232 65.9
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.1e-84 316.2 360 47.2
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 2.6e-83 313.2 312 53.8
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 2.1e-80 303.5 241 65.1
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 6.7e-79 298.5 270 55.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 3.3e-78 296.2 305 52.8
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.6e-77 293.9 327 46.8
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-76 291.2 179 76.5
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 2.3e-71 273.5 171 75.4
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 3.4e-67 259.6 279 49.5
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.0e-66 258.1 329 45.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.1e-65 254.6 296 49.0
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 8.8e-55 218.4 225 52.0
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-48 198.0 192 57.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 8.0e-48 195.3 351 37.0
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.3e-45 188.0 146 61.0
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 4.1e-44 183.0 301 39.5
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 5.9e-35 152.5 320 31.9
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.7e-34 151.0 140 57.1
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.0e-31 140.2 190 41.6
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 8.9e-23 112.1 71 78.9
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 6.6e-10 69.3 55 60.0
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.1e-09 68.6 104 36.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.5e-09 67.4 67 52.2


User provided reference genes

Program Settings