Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 9.0e-193 676.8 349 100.0
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.8e-178 628.6 350 94.3
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 3.7e-178 628.2 350 92.9
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 2.0e-168 595.9 353 90.1
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 3.2e-166 588.6 350 88.0
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 3.4e-160 568.5 353 86.1
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 1.1e-155 553.5 348 82.8
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 5.9e-152 541.2 343 83.1
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 4.7e-149 531.6 353 78.2
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 6.1e-149 531.2 341 82.1
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 3.0e-148 528.9 349 79.9
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 2.6e-147 525.8 352 79.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 3.5e-144 515.4 343 80.5
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 2.7e-141 505.8 343 80.5
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 4.4e-139 498.4 322 81.4
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 2.7e-136 489.2 338 78.1
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 5.9e-136 488.0 368 72.8
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.7e-130 469.9 322 78.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.5e-118 429.5 286 76.6
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 1.2e-117 427.2 313 71.6
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.0e-107 393.3 280 71.8
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 3.2e-105 386.0 357 59.7
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 4.1e-105 385.6 283 69.3
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 9.2e-105 384.4 268 72.8
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.7e-104 382.9 365 58.4
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 7.8e-104 381.3 357 59.1
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.3e-103 380.6 286 69.6
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.7e-103 380.2 286 69.6
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.7e-103 380.2 270 68.9
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 2.3e-103 379.8 320 63.4
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 6.6e-103 378.3 353 58.4
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.1e-102 377.5 361 58.7
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 1.5e-102 377.1 274 68.6
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 1.9e-102 376.7 301 64.1
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 5.6e-102 375.2 313 62.0
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 7.3e-102 374.8 277 68.2
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 2.8e-101 372.9 285 67.4
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 5.8e-99 365.2 325 60.0
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 5.8e-99 365.2 338 57.7
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 7.5e-99 364.8 266 68.8
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.1e-97 360.9 281 66.2
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 1.9e-97 360.1 364 52.7
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 9.2e-97 357.8 256 69.1
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.0e-95 354.4 273 64.1
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.3e-94 349.4 292 61.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 7.3e-94 348.2 292 61.6
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.1e-93 346.7 266 65.8
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 2.1e-93 346.7 283 63.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.7e-93 345.5 266 65.4
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 4.7e-93 345.5 352 54.8
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.1e-92 344.4 285 62.1
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.1e-92 344.4 330 56.4
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 1.8e-92 343.6 283 61.5
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.9e-92 341.3 285 61.4
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 2.6e-91 339.7 282 59.6
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 3.4e-91 339.3 256 64.5
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 4.4e-91 339.0 364 51.1
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 5.8e-91 338.6 282 59.6
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 2.2e-90 336.7 285 60.7
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 2.2e-90 336.7 279 58.1
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 2.2e-90 336.7 268 62.7
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 2.4e-89 333.2 332 53.6
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.4e-89 333.2 271 60.9
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 5.4e-89 332.0 315 54.9
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 9.2e-89 331.3 276 60.9
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 9.2e-89 331.3 268 61.9
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 1.6e-88 330.5 255 63.5
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 2.1e-88 330.1 265 60.0
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.1e-88 330.1 282 60.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 6.0e-88 328.6 279 59.5
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 3.0e-87 326.2 269 61.3
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 3.0e-87 326.2 310 55.2
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 3.9e-87 325.9 265 60.8
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 4.3e-86 322.4 266 62.0
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 5.6e-86 322.0 268 61.2
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 9.6e-86 321.2 282 56.4
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.2e-85 320.9 271 58.3
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.6e-85 320.5 278 60.4
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.8e-84 317.0 262 61.1
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 2.4e-84 316.6 268 60.4
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 6.9e-84 315.1 333 51.7
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 9.0e-84 314.7 267 60.3
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.3e-82 310.8 358 50.0
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 4.9e-82 308.9 284 56.7
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 4.9e-82 308.9 269 58.7
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 1.4e-81 307.4 279 55.9
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 1.9e-81 307.0 269 58.0
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 7.1e-81 305.1 367 47.1
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 7.1e-81 305.1 336 49.4
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 1.2e-80 304.3 350 47.4
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 3.5e-80 302.8 361 48.8
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 1.0e-79 301.2 319 50.8
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 1.3e-79 300.8 297 52.9
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.0e-79 299.7 280 55.0
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 6.6e-79 298.5 260 56.5
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.1e-78 297.7 266 56.4
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.1e-77 293.5 271 55.4
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 2.2e-74 283.5 289 48.8
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 1.4e-73 280.8 235 60.0
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 6.0e-72 275.4 231 59.3
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.5e-70 270.8 205 61.5
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 7.4e-70 268.5 355 46.8
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 1.1e-62 244.6 203 57.6
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 5.3e-60 235.7 230 51.7
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 6.7e-47 192.2 147 64.6
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 8.7e-47 191.8 162 58.6
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 1.1e-36 158.3 136 58.8
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 4.4e-30 136.3 280 35.0
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 1.3e-21 108.2 197 36.5
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 4.1e-20 103.2 261 28.7
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 1.5e-17 94.7 74 64.9
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 3.5e-11 73.6 279 22.9
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 8.0e-08 62.4 81 46.9
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 4.0e-07 60.1 93 45.2
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.2e-06 58.5 67 43.3


User provided reference genes

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