Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G24310 Arabidopsis lyrata HOM05D005953 ORTHO05D004056 1.3e-25 119.4 81 100.0
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 1.3e-22 109.4 81 85.2
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 7.3e-21 103.6 81 74.1
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 1.2e-18 96.3 81 74.1
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 1.2e-18 96.3 81 74.1
BcaC07g38320 Brassica carinata HOM05D005953 ORTHO05D004056 5.8e-18 94.0 81 72.8
BraA08t33974Z Brassica rapa HOM05D005953 ORTHO05D004056 5.8e-18 94.0 81 74.1
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 2.2e-17 92.0 81 69.1
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 4.9e-17 90.9 81 70.4
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 6.4e-17 90.5 81 76.5
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 6.4e-17 90.5 81 76.5
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 6.4e-17 90.5 81 76.5
C08p10750 Brassica napus HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 70.4
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 67.9
BolC8t48747H Brassica oleracea HOM05D005953 ORTHO05D004056 2.4e-16 88.6 81 70.4
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 3.6e-12 74.7 81 69.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 1.2e-10 69.7 81 53.1
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 9.9e-10 66.6 81 67.9
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 4.9e-09 64.3 82 65.9
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.4e-08 62.8 81 44.4
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.4e-08 62.0 82 48.8
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 9.2e-08 60.1 81 48.1
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 1.2e-07 59.7 81 50.6
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 2.1e-07 58.9 81 44.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 2.7e-07 58.5 82 46.3
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.0e-07 57.4 86 47.7
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 6.0e-07 57.4 85 50.6
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 46.9
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 46.9
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 7.8e-07 57.0 81 46.9
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 1.3e-06 56.2 84 52.4
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.3e-06 56.2 81 45.7
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.7e-06 55.8 89 47.2
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 3.0e-06 55.1 81 50.6
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 3.0e-06 55.1 84 50.0
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 3.0e-06 55.1 81 42.0
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.9e-06 54.7 84 50.0
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 3.9e-06 54.7 81 42.0
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 5.1e-06 54.3 82 47.6
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 5.1e-06 54.3 81 53.1
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 5.1e-06 54.3 83 48.2
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 5.1e-06 54.3 83 48.2
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 6.6e-06 53.9 46 67.4
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 6.6e-06 53.9 82 47.6
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 6.6e-06 53.9 83 56.6
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 6.6e-06 53.9 83 45.8
HPP92_014633 Vanilla planifolia HOM05D005953 ORTHO05D004056 6.6e-06 53.9 87 48.3
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 8.6e-06 53.5 81 56.8
Aa31LG2G22140 Aethionema arabicum HOM05D005953 ORTHO05D004056 8.6e-06 53.5 83 61.4
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 8.6e-06 53.5 85 45.9
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 8.6e-06 53.5 85 45.9
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 8.6e-06 53.5 82 47.6
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 8.6e-06 53.5 81 40.7


User provided reference genes

Program Settings