Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 1.5e-32 142.9 75 100.0
AT4G29030 Arabidopsis thaliana HOM05D008344 ORTHO05D006413 8.0e-29 130.6 75 92.0
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 9.7e-27 123.6 77 87.0
Thhalv10026613m.g Eutrema salsugineum HOM05D008344 ORTHO05D006413 2.2e-26 122.5 73 87.7
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 2.0e-24 115.9 75 81.3
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 2.0e-24 115.9 75 81.3
Sp7g26970 Schrenkiella parvula HOM05D008344 ORTHO05D006413 2.0e-24 115.9 75 81.3
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 4.5e-24 114.8 75 80.0
BolC1t01011H Brassica oleracea HOM05D008344 ORTHO05D006413 5.9e-24 114.4 75 80.0
A03p58660 Brassica napus HOM05D008344 ORTHO05D006413 1.0e-23 113.6 75 81.3
BraA03t14927Z Brassica rapa HOM05D008344 ORTHO05D006413 1.0e-23 113.6 75 81.3
BcaC07g38365 Brassica carinata HOM05D008344 ORTHO05D006413 1.5e-22 109.8 75 76.0
C08p11130 Brassica napus HOM05D008344 ORTHO05D006413 1.5e-22 109.8 75 76.0
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 1.9e-22 109.4 69 81.2
BolC8t48782H Brassica oleracea HOM05D008344 ORTHO05D006413 3.2e-22 108.6 75 74.7
BcaB03g12592 Brassica carinata HOM05D008344 ORTHO05D006413 2.1e-21 105.9 75 77.3
BolC8t48789H Brassica oleracea HOM05D008344 ORTHO05D006413 3.6e-21 105.1 73 75.3
BcaC09g51682 Brassica carinata HOM05D008344 ORTHO05D006413 1.2e-16 90.1 57 80.7
C07p56610 Brassica napus HOM05D008344 ORTHO05D006413 1.6e-16 89.7 55 81.8
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 3.5e-08 62.0 63 63.5
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 1.0e-07 60.5 61 59.0
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 2.3e-07 59.3 61 54.1
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 3.8e-07 58.5 71 54.9
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 6.6e-07 57.8 54 63.0
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.1e-06 57.0 53 66.0
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 1.5e-06 56.6 55 61.8
THA.LOC104804024 Tarenaya hassleriana HOM05D008344 ORTHO05D006413 1.5e-06 56.6 52 57.7
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 2.5e-06 55.8 59 64.4
Migut.N02250 Erythranthe guttata HOM05D007427 ORTHO05D006413 3.3e-06 55.5 63 58.7
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 4.2e-06 55.1 66 54.5
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 4.2e-06 55.1 57 61.4
SGA_v2.0_scaffold42G16152 Striga asiatica HOM05D007427 ORTHO05D006413 4.2e-06 55.1 86 55.8
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 7.2e-06 54.3 57 54.4
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 7.2e-06 54.3 57 54.4
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 7.2e-06 54.3 63 58.7
FvH4_2g19680 Fragaria vesca HOM05D007427 ORTHO05D006413 9.5e-06 53.9 57 52.6
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 9.5e-06 53.9 61 55.7


User provided reference genes

Program Settings