Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G23420 Arabidopsis lyrata HOM05D008647 ORTHO05D010896 1.5e-42 175.6 82 100.0
AT4G29033 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 3.5e-39 164.5 82 93.9
Carub.0007s1160 Capsella rubella HOM05D008647 ORTHO05D010896 9.0e-35 149.8 82 82.9
Thhalv10015439m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 1.7e-30 135.6 81 77.8
CARHR236760 Cardamine hirsuta HOM05D008647 ORTHO05D010896 3.0e-30 134.8 83 78.3
C03p19620 Brassica napus HOM05D008647 ORTHO05D010896 7.1e-24 113.6 83 67.5
BolC3t14342H Brassica oleracea HOM05D008647 ORTHO05D010896 7.1e-24 113.6 83 67.5
A03p16670 Brassica napus HOM05D008647 ORTHO05D010896 1.6e-23 112.5 83 66.3
BraA03t10953Z Brassica rapa HOM05D008647 ORTHO05D010896 1.6e-23 112.5 83 66.3
Thhalv10023953m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 1.4e-16 89.4 73 56.2
Thhalv10026922m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 2.5e-16 88.6 73 57.5
C08p11150 Brassica napus HOM05D008647 ORTHO05D010896 3.9e-14 81.3 74 54.1
BolC8t48785H Brassica oleracea HOM05D008647 ORTHO05D010896 3.7e-12 74.7 77 45.5
CARHR049960 Cardamine hirsuta HOM05D008647 ORTHO05D017692 3.7e-12 74.7 77 45.5
BcaC07g38367 Brassica carinata HOM05D008647 ORTHO05D010896 4.8e-12 74.3 63 52.4
A08p19810 Brassica napus HOM05D008647 ORTHO05D010896 3.1e-11 71.6 74 52.7
BraA08t33941Z Brassica rapa HOM05D008647 ORTHO05D010896 3.1e-11 71.6 74 52.7
Aa31LG2G21360 Aethionema arabicum HOM05D008647 ORTHO05D010896 5.3e-11 70.9 44 59.1
Carub.0005s0246 Capsella rubella HOM05D008647 ORTHO05D010896 5.3e-11 70.9 74 45.9
C08p11200 Brassica napus HOM05D008647 ORTHO05D010896 6.9e-11 70.5 74 51.4
A08p19840 Brassica napus HOM05D008647 ORTHO05D010896 1.5e-10 69.3 75 49.3
BraA08t33943Z Brassica rapa HOM05D008647 ORTHO05D010896 1.5e-10 69.3 75 49.3
THA.LOC109116700 Tarenaya hassleriana HOM05D008647 ORTHO05D010896 1.5e-10 69.3 74 48.6
BolC6t36908H Brassica oleracea HOM05D008647 ORTHO05D010896 2.0e-10 68.9 74 45.9
BolC8t48787H Brassica oleracea HOM05D008647 ORTHO05D010896 3.4e-10 68.2 75 48.0
A05p16670 Brassica napus HOM05D008647 ORTHO05D010896 4.5e-10 67.8 74 43.2
BolC8t48793H Brassica oleracea HOM05D008647 ORTHO05D010896 4.5e-10 67.8 75 49.3
AT1G35537 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 2.2e-09 65.5 79 44.3
C08p11160 Brassica napus HOM05D008647 ORTHO05D010896 2.9e-09 65.1 75 46.7
Thhalv10026914m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 3.8e-09 64.7 75 42.7
A09p16520 Brassica napus HOM05D030127 ORTHO05D017692 5.0e-09 64.3 76 43.4
C09p20060 Brassica napus HOM05D030127 ORTHO05D017692 5.0e-09 64.3 76 43.4
BolC9t54915H Brassica oleracea HOM05D030127 ORTHO05D017692 5.0e-09 64.3 76 43.4
BraA09t37289Z Brassica rapa HOM05D030127 ORTHO05D017692 5.0e-09 64.3 76 43.4
Carub.0007s0275 Capsella rubella HOM05D008647 ORTHO05D010896 6.5e-09 63.9 79 41.8
AT3G27835 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 1.2e-07 59.7 80 38.8
Actinidia30099 Actinidia chinensis HOM05D017988 ORTHO05D010896 1.6e-07 59.3 67 44.8
Carub.0001s3316 Capsella rubella HOM05D008647 ORTHO05D010896 6.1e-07 57.4 77 39.0
Carub.0003s3443 Capsella rubella HOM05D008647 ORTHO05D114551 3.0e-06 55.1 87 37.9
CARHR034300 Cardamine hirsuta HOM05D008647 ORTHO05D010896 3.0e-06 55.1 77 40.3
Carub.0003s2609 Capsella rubella HOM05D008647 ORTHO05D017692 5.1e-06 54.3 67 38.8
Carub.0006s2827 Capsella rubella HOM05D008647 ORTHO05D010896 8.7e-06 53.5 67 47.8
Carub.0007s1158 Capsella rubella HOM05D008647 ORTHO05D010896 8.7e-06 53.5 67 46.3
Oeu018512.1 Olea europaea HOM05D017988 ORTHO05D010896 8.7e-06 53.5 67 40.3


User provided reference genes

Program Settings