Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 2.1e-154 548.9 259 100.0
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 4.7e-138 494.6 260 90.0
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.7e-132 476.1 260 86.9
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 6.1e-130 467.6 273 82.8
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 4.0e-129 464.9 259 84.6
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 3.4e-128 461.8 261 83.9
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.6e-122 443.0 260 81.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.3e-121 439.1 260 81.5
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.6e-120 435.6 260 80.4
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 3.2e-118 428.7 260 77.3
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 4.0e-113 411.8 252 77.4
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 4.0e-113 411.8 252 77.4
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 3.7e-111 405.2 260 75.8
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 1.6e-106 389.8 252 76.2
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 3.3e-99 365.5 219 79.5
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 7.3e-99 364.4 199 85.9
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.8e-97 359.8 218 78.4
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.8e-97 359.8 218 78.4
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.4e-86 323.6 258 61.6
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 5.4e-86 321.6 252 66.3
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.2e-85 320.5 244 63.1
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 8.7e-84 314.3 260 58.8
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.6e-82 308.9 260 58.1
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 4.8e-82 308.5 259 58.7
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.4e-81 307.0 254 59.8
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 1.8e-81 306.6 255 56.9
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.4e-81 306.2 259 58.3
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.2e-80 303.9 257 57.2
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.5e-80 303.5 203 68.5
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.5e-80 303.5 261 57.9
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 2.0e-80 303.1 260 57.3
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.0e-80 303.1 259 58.3
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 5.8e-80 301.6 220 64.5
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 7.6e-80 301.2 257 56.4
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 9.9e-80 300.8 225 63.1
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 4.9e-79 298.5 219 63.9
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 2.4e-78 296.2 265 55.8
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 4.2e-78 295.4 261 56.3
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 5.4e-78 295.0 200 65.0
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.7e-77 292.7 218 61.9
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 3.5e-77 292.4 216 62.5
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 7.9e-77 291.2 222 61.3
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 7.9e-77 291.2 262 56.1
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 7.9e-77 291.2 221 60.2
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.0e-76 290.8 254 56.3
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 1.0e-76 290.8 213 60.6
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.3e-76 290.4 223 59.6
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.3e-76 290.4 262 56.1
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.3e-76 290.4 200 66.5
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 2.3e-76 289.7 260 53.5
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.9e-76 288.9 255 54.5
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.1e-75 287.3 203 65.0
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.1e-75 287.3 229 59.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.1e-75 287.3 226 58.4
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.5e-75 287.0 261 53.6
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 4.3e-75 285.4 236 58.9
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.1e-74 283.1 215 61.9
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 2.1e-74 283.1 204 62.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.7e-74 282.3 208 63.0
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.7e-74 282.3 262 55.3
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.7e-74 282.3 262 55.3
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 8.1e-74 281.2 219 58.0
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 8.1e-74 281.2 253 56.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 9.0e-73 277.7 264 58.0
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.2e-72 277.3 263 57.8
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 1.2e-72 277.3 201 64.2
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.5e-72 276.9 217 60.8
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 3.4e-72 275.8 212 61.8
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 5.8e-72 275.0 240 55.4
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 9.9e-72 274.2 224 57.6
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.3e-71 273.9 211 61.1
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.3e-71 273.9 193 65.3
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.7e-71 273.5 189 63.5
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 2.2e-71 273.1 209 62.2
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.2e-71 273.1 194 65.5
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 2.9e-71 272.7 193 64.2
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.9e-71 272.7 200 64.0
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 2.9e-71 272.7 238 57.1
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 6.4e-71 271.6 217 60.4
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 6.4e-71 271.6 204 60.3
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 8.4e-71 271.2 240 55.8
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.4e-70 270.4 270 54.4
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 9.3e-70 267.7 245 55.5
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.2e-69 267.3 252 52.4
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.7e-69 266.2 209 61.2
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 1.0e-68 264.2 241 54.8
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.8e-68 263.5 238 55.9
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 2.3e-68 263.1 218 58.7
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 4.3e-67 258.8 269 50.2
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 7.4e-67 258.1 206 58.3
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 2.1e-66 256.5 238 55.5
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.4e-65 253.1 176 68.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.1e-65 252.7 176 68.2
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.1e-65 252.7 176 68.2
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 5.3e-65 251.9 176 68.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 2.0e-64 250.0 227 52.9
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 4.5e-64 248.8 201 58.7
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 4.5e-64 248.8 261 49.0
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.3e-63 247.3 234 52.6
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.3e-63 247.3 205 55.6
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 8.4e-63 244.6 240 52.9
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.4e-62 243.8 243 49.8
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.2e-61 240.7 219 54.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.7e-61 239.6 235 52.3
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 7.9e-61 238.0 195 54.9
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.3e-60 237.3 195 54.9
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 3.7e-58 229.2 193 57.0
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 6.5e-55 218.4 209 51.2
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 4.2e-54 215.7 208 51.9
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.7e-53 213.0 145 64.1
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 4.6e-53 212.2 160 61.2
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 8.8e-52 208.0 194 51.5
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 8.2e-50 201.4 161 57.8
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.5e-38 163.3 122 55.7
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 2.8e-34 149.8 124 51.6
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 6.3e-34 148.7 121 53.7
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 1.6e-32 144.1 82 67.1
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 8.0e-29 131.7 102 52.9
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 3.4e-27 126.3 96 57.3
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.2e-13 81.3 177 32.8
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 9.5e-06 55.1 116 35.3


User provided reference genes

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