Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.2e-41 172.6 78 100.0
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.4e-37 159.1 78 91.0
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.6e-31 138.3 78 82.1
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 9.8e-31 136.3 78 82.1
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 2.4e-29 131.7 78 82.1
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 7.7e-28 126.7 78 78.2
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.7e-27 125.6 78 79.5
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.9e-27 124.8 79 75.9
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 8.5e-27 123.2 77 74.0
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 8.5e-27 123.2 78 73.1
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.5e-26 121.7 78 73.1
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 3.2e-26 121.3 78 73.1
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.2e-26 120.9 78 71.8
CARHR237080 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.3e-22 109.4 78 67.9
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.1e-21 106.3 78 61.5
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 9.1e-21 103.2 78 62.8
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 9.1e-21 103.2 78 62.8
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 9.1e-21 103.2 78 62.8
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 1.2e-20 102.8 78 64.1
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.7e-19 99.0 79 63.3
C03p80550 Brassica napus HOM05D008236 ORTHO05D010394 6.6e-19 97.1 79 58.2
BolC3t20299H Brassica oleracea HOM05D008236 ORTHO05D010394 2.5e-18 95.1 79 57.0
BcaNung00445 Brassica carinata HOM05D008236 ORTHO05D010394 7.2e-18 93.6 51 76.5
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 2.1e-17 92.0 78 55.1
A08p21920 Brassica napus HOM05D008236 ORTHO05D010394 4.7e-17 90.9 79 55.7
BraA08t34144Z Brassica rapa HOM05D008236 ORTHO05D010394 4.7e-17 90.9 79 55.7
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 1.0e-16 89.7 83 59.0
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 50.6
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 50.6
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 50.6
A08p21900 Brassica napus HOM05D008236 ORTHO05D010394 2.3e-16 88.6 79 57.0
BraA08t34143Z Brassica rapa HOM05D008236 ORTHO05D010394 2.3e-16 88.6 79 57.0
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 1.2e-15 86.3 76 52.6
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 1.2e-15 86.3 76 52.6
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 1.2e-15 86.3 76 52.6
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 1.2e-15 86.3 76 52.6
A08p18850 Brassica napus HOM05D008236 ORTHO05D010394 2.0e-15 85.5 79 57.0
BraA08t33846Z Brassica rapa HOM05D008236 ORTHO05D010394 3.4e-15 84.7 79 55.7
BcaC01g01110 Brassica carinata HOM05D008236 ORTHO05D010394 4.4e-15 84.3 79 55.7
C03p88220 Brassica napus HOM05D008236 ORTHO05D010394 4.4e-15 84.3 79 55.7
BolC3t21132H Brassica oleracea HOM05D008236 ORTHO05D010394 4.4e-15 84.3 79 55.7
A08p18860 Brassica napus HOM05D008236 ORTHO05D010394 5.7e-15 84.0 80 56.2
BolC3t21135H Brassica oleracea HOM05D008236 ORTHO05D010394 5.7e-15 84.0 80 55.0
BraA08t33847Z Brassica rapa HOM05D008236 ORTHO05D010394 5.7e-15 84.0 80 56.2
BcaB03g12677 Brassica carinata HOM05D008236 ORTHO05D010394 7.5e-15 83.6 79 55.7
C03p88270 Brassica napus HOM05D008236 ORTHO05D010394 1.3e-14 82.8 80 55.0
BraA03t14925Z Brassica rapa HOM05D008236 ORTHO05D010394 1.3e-14 82.8 65 56.9
Carub.0007s1129 Capsella rubella HOM05D008236 ORTHO05D010394 1.7e-14 82.4 79 53.2
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 2.2e-14 82.0 79 48.1
AL4G18670 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.3e-14 80.5 82 53.7
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.1e-13 79.7 80 53.8
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 2.4e-13 78.6 79 46.8
AT4G29273 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.1e-13 77.8 79 53.2
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 5.9e-12 73.9 81 44.4
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 5.9e-12 73.9 81 44.4
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 7.8e-12 73.6 79 53.2
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.3e-11 72.8 79 51.9
AL7G23170 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.7e-11 72.4 75 50.7
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.3e-11 72.0 78 52.6
AT2G22121 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.0e-11 70.9 80 48.8
Aa31LG2G21170 Aethionema arabicum HOM05D008236 ORTHO05D010394 8.6e-11 70.1 54 61.1
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.3e-10 68.2 78 51.3
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.3e-10 67.8 79 49.4
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.6e-09 65.9 78 42.3
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.6e-09 65.9 78 42.3
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 2.6e-07 58.5 78 39.7
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 2.6e-07 58.5 78 39.7
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 5.8e-07 57.4 78 38.5
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 5.8e-07 57.4 78 38.5
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 9.8e-07 56.6 81 39.5
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 9.8e-07 56.6 83 38.6
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 2.9e-06 55.1 81 38.3
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 2.9e-06 55.1 81 38.3
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 2.9e-06 55.1 81 38.3
Nn3g17741 Nelumbo nucifera HOM05D014595 ORTHO05D015167 3.7e-06 54.7 77 41.6


User provided reference genes

Program Settings