Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 2.3e-40 168.3 78 100.0
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 9.8e-31 136.3 78 83.3
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.3e-30 133.7 78 78.2
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 1.8e-29 132.1 78 83.3
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.7e-28 128.3 78 76.9
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 5.9e-28 127.1 79 75.9
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 2.9e-27 124.8 78 79.5
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 8.5e-27 123.2 78 76.9
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.1e-26 122.9 78 74.4
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.1e-26 122.9 78 75.6
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 9.4e-26 119.8 77 74.0
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.2e-25 119.4 78 71.8
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.6e-25 119.0 78 75.6
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 5.7e-23 110.5 78 67.9
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 5.7e-23 110.5 78 67.9
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 5.7e-23 110.5 78 67.9
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 7.5e-23 110.2 78 67.9
CARHR237080 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.1e-21 106.3 78 65.4
BolC3t20299H Brassica oleracea HOM05D008236 ORTHO05D010394 1.6e-20 102.4 79 60.8
C03p80550 Brassica napus HOM05D008236 ORTHO05D010394 2.7e-20 101.7 79 60.8
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.7e-20 101.7 79 63.3
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.0e-19 99.8 78 57.7
A08p21920 Brassica napus HOM05D008236 ORTHO05D010394 1.3e-19 99.4 79 59.5
BraA08t34144Z Brassica rapa HOM05D008236 ORTHO05D010394 1.3e-19 99.4 79 59.5
A08p21900 Brassica napus HOM05D008236 ORTHO05D010394 2.5e-18 95.1 79 59.5
BraA08t34143Z Brassica rapa HOM05D008236 ORTHO05D010394 5.5e-18 94.0 79 58.2
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 1.0e-16 89.7 78 53.8
A08p18850 Brassica napus HOM05D008236 ORTHO05D010394 1.4e-16 89.4 79 55.7
BcaB03g12677 Brassica carinata HOM05D008236 ORTHO05D010394 6.8e-16 87.0 79 55.7
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 8.9e-16 86.7 83 56.6
A08p18860 Brassica napus HOM05D008236 ORTHO05D010394 8.9e-16 86.7 80 56.2
BraA08t33846Z Brassica rapa HOM05D008236 ORTHO05D010394 8.9e-16 86.7 79 54.4
BraA08t33847Z Brassica rapa HOM05D008236 ORTHO05D010394 8.9e-16 86.7 80 56.2
C03p88220 Brassica napus HOM05D008236 ORTHO05D010394 1.2e-15 86.3 79 54.4
BcaC01g01110 Brassica carinata HOM05D008236 ORTHO05D010394 1.5e-15 85.9 79 54.4
BolC3t21132H Brassica oleracea HOM05D008236 ORTHO05D010394 1.5e-15 85.9 79 54.4
BcaNung00445 Brassica carinata HOM05D008236 ORTHO05D010394 3.4e-15 84.7 51 70.6
BolC3t21135H Brassica oleracea HOM05D008236 ORTHO05D010394 9.8e-15 83.2 80 53.8
C03p88270 Brassica napus HOM05D008236 ORTHO05D010394 1.3e-14 82.8 80 53.8
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 8.3e-14 80.1 79 48.1
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 8.3e-14 80.1 79 48.1
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.2e-13 78.2 79 54.4
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 3.2e-13 78.2 79 48.1
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.1e-13 77.8 80 53.8
BraA03t14925Z Brassica rapa HOM05D008236 ORTHO05D010394 4.1e-13 77.8 65 56.9
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 7.0e-13 77.0 76 50.0
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 7.0e-13 77.0 76 50.0
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 7.0e-13 77.0 76 50.0
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 7.0e-13 77.0 76 50.0
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 1.6e-12 75.9 79 45.6
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.6e-12 74.3 79 54.4
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 7.8e-12 73.6 80 51.2
AL4G18670 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.3e-11 72.8 82 50.0
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 1.7e-11 72.4 79 44.3
Aa31LG2G21170 Aethionema arabicum HOM05D008236 ORTHO05D010394 2.9e-11 71.6 54 61.1
Carub.0007s1129 Capsella rubella HOM05D008236 ORTHO05D010394 2.9e-11 71.6 80 53.8
AL7G23170 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 5.0e-11 70.9 75 48.0
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 8.6e-11 70.1 79 41.8
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 8.6e-11 70.1 79 41.8
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.1e-10 69.7 79 49.4
AT4G29273 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.5e-10 69.3 82 50.0
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.5e-10 69.3 78 48.7
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 9.5e-10 66.6 81 42.0
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 2.8e-09 65.1 81 40.7
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 2.8e-09 65.1 81 40.7
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 2.8e-09 65.1 81 40.7
AT2G22121 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.2e-09 63.9 80 46.2
A03p58890 Brassica napus HOM05D009471 ORTHO05D011939 1.4e-08 62.8 81 39.5
BraA03t14949Z Brassica rapa HOM05D009471 ORTHO05D011939 1.4e-08 62.8 81 39.5
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 3.1e-08 61.6 81 39.5
AL8G22100 Arabidopsis lyrata HOM05D010086 ORTHO05D010053 6.8e-08 60.5 78 34.6
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 8.9e-08 60.1 83 39.8
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 1.2e-07 59.7 78 35.9
C07p39500 Brassica napus HOM05D010086 ORTHO05D010053 2.0e-07 58.9 80 38.8
BolC7t44469H Brassica oleracea HOM05D010086 ORTHO05D010053 2.0e-07 58.9 80 38.8
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 2.6e-07 58.5 84 39.3
BraA06t26798Z Brassica rapa HOM05D010086 ORTHO05D010053 2.6e-07 58.5 80 37.5
Thhalv10005401m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 2.6e-07 58.5 78 35.9
BcaC06g30726 Brassica carinata HOM05D010086 ORTHO05D010053 3.4e-07 58.2 80 40.0
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 5.8e-07 57.4 78 37.2
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 5.8e-07 57.4 78 37.2
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 9.8e-07 56.6 78 35.9
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 9.8e-07 56.6 78 35.9
BolC7t46163H Brassica oleracea HOM05D009471 ORTHO05D011939 1.3e-06 56.2 65 40.0
BolC7t46162H Brassica oleracea HOM05D009471 ORTHO05D011939 8.3e-06 53.5 81 37.0


User provided reference genes

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