Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22690 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 1.6e-41 172.2 78 100.0
Carub.0003s2943 Capsella rubella HOM05D009096 ORTHO05D011258 4.1e-29 131.0 77 77.9
Carub.0007s1090 Capsella rubella HOM05D009096 ORTHO05D011258 4.1e-29 131.0 77 77.9
Carub.0007s1091 Capsella rubella HOM05D009096 ORTHO05D011258 1.3e-22 109.4 73 75.3
AL7G22670 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 1.4e-21 105.9 72 66.7
CARHR237450 Cardamine hirsuta HOM05D009096 ORTHO05D011258 6.6e-19 97.1 73 67.1
CARHR237460 Cardamine hirsuta HOM05D009096 ORTHO05D011258 1.9e-18 95.5 77 63.6
Carub.0007s1087 Capsella rubella HOM05D009096 ORTHO05D011258 1.2e-17 92.8 72 59.7
Carub.0007s1089 Capsella rubella HOM05D009096 ORTHO05D011258 1.6e-17 92.4 72 58.3
Thhalv10009182m.g Eutrema salsugineum HOM05D009096 ORTHO05D011258 1.6e-17 92.4 75 62.7
CARHR237480 Cardamine hirsuta HOM05D009096 ORTHO05D011258 1.0e-16 89.7 73 61.6
CARHR176390 Cardamine hirsuta HOM05D009096 ORTHO05D011258 3.4e-15 84.7 73 61.6
BolC8t49785H Brassica oleracea HOM05D009096 ORTHO05D011258 8.3e-14 80.1 72 54.2
Carub.0008s0449 Capsella rubella HOM05D009096 ORTHO05D011258 8.3e-14 80.1 73 54.8
C06p31150 Brassica napus HOM05D009096 ORTHO05D011258 1.7e-11 72.4 77 50.6
C03p38670 Brassica napus HOM05D009096 ORTHO05D011258 1.9e-10 68.9 77 49.4
BolC3t16141H Brassica oleracea HOM05D009096 ORTHO05D011258 1.9e-10 68.9 77 49.4
C06p31070 Brassica napus HOM05D009096 ORTHO05D011258 3.3e-10 68.2 77 49.4
C06p31080 Brassica napus HOM05D009096 ORTHO05D011258 3.3e-10 68.2 77 49.4
CARHR215500 Cardamine hirsuta HOM05D009096 ORTHO05D011258 9.5e-10 66.6 72 51.4
C06p31090 Brassica napus HOM05D009096 ORTHO05D011258 1.2e-09 66.2 77 49.4
AT5G37474 Arabidopsis thaliana HOM05D009096 ORTHO05D011258 2.1e-09 65.5 73 46.6
C06p31020 Brassica napus HOM05D009096 ORTHO05D011258 2.1e-09 65.5 80 45.0
BolC6t38254H Brassica oleracea HOM05D009096 ORTHO05D011258 2.1e-09 65.5 80 45.0
BraA07t30430Z Brassica rapa HOM05D009096 ORTHO05D011258 2.8e-09 65.1 80 45.0
BraA03t12343Z Brassica rapa HOM05D009096 ORTHO05D011258 4.7e-09 64.3 77 44.2
C08p21450 Brassica napus HOM05D009096 ORTHO05D011258 3.1e-08 61.6 76 46.1
BcaC01g06825 Brassica carinata HOM05D009096 ORTHO05D011258 4.0e-08 61.2 46 52.2
AL7G46210 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 6.8e-08 60.5 73 43.8
BolC8t49784H Brassica oleracea HOM05D009096 ORTHO05D011258 1.5e-07 59.3 76 44.7


User provided reference genes

Program Settings