Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22670 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 5.2e-43 177.2 81 100.0
Carub.0007s1087 Capsella rubella HOM05D009096 ORTHO05D011258 5.4e-24 114.0 71 69.0
Carub.0007s1089 Capsella rubella HOM05D009096 ORTHO05D011258 7.8e-23 110.2 72 65.3
AL7G22690 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 5.0e-22 107.5 72 66.7
Thhalv10009182m.g Eutrema salsugineum HOM05D009096 ORTHO05D011258 6.6e-22 107.1 79 62.0
CARHR237450 Cardamine hirsuta HOM05D009096 ORTHO05D011258 8.0e-20 100.1 67 67.2
Carub.0003s2943 Capsella rubella HOM05D009096 ORTHO05D011258 1.4e-19 99.4 70 64.3
Carub.0007s1090 Capsella rubella HOM05D009096 ORTHO05D011258 1.4e-19 99.4 70 64.3
CARHR237460 Cardamine hirsuta HOM05D009096 ORTHO05D011258 1.4e-19 99.4 67 61.2
BolC8t49785H Brassica oleracea HOM05D009096 ORTHO05D011258 1.5e-18 95.9 68 58.8
Carub.0008s0449 Capsella rubella HOM05D009096 ORTHO05D011258 1.7e-17 92.4 67 61.2
CARHR237480 Cardamine hirsuta HOM05D009096 ORTHO05D011258 2.2e-17 92.0 67 59.7
Carub.0007s1091 Capsella rubella HOM05D009096 ORTHO05D011258 4.1e-16 87.8 71 57.7
CARHR176390 Cardamine hirsuta HOM05D009096 ORTHO05D011258 4.6e-15 84.3 67 56.7
CARHR215500 Cardamine hirsuta HOM05D009096 ORTHO05D011258 5.0e-14 80.9 67 53.7
BolC8t49784H Brassica oleracea HOM05D009096 ORTHO05D011258 3.3e-13 78.2 70 52.9
AT5G37474 Arabidopsis thaliana HOM05D009096 ORTHO05D011258 4.3e-13 77.8 80 43.8
C08p21450 Brassica napus HOM05D009096 ORTHO05D011258 1.6e-12 75.9 70 51.4
C06p31150 Brassica napus HOM05D009096 ORTHO05D011258 8.1e-12 73.6 71 47.9
C03p38670 Brassica napus HOM05D009096 ORTHO05D011258 1.8e-11 72.4 71 46.5
BolC3t16141H Brassica oleracea HOM05D009096 ORTHO05D011258 1.8e-11 72.4 71 46.5
C06p31070 Brassica napus HOM05D009096 ORTHO05D011258 3.1e-11 71.6 71 46.5
C06p31080 Brassica napus HOM05D009096 ORTHO05D011258 3.1e-11 71.6 71 46.5
AL7G46210 Arabidopsis lyrata HOM05D009096 ORTHO05D011258 1.2e-10 69.7 67 44.8
C06p31090 Brassica napus HOM05D009096 ORTHO05D011258 3.4e-10 68.2 71 45.1
C06p31020 Brassica napus HOM05D009096 ORTHO05D011258 1.3e-09 66.2 72 43.1
BolC6t38254H Brassica oleracea HOM05D009096 ORTHO05D011258 1.3e-09 66.2 72 43.1
BraA07t30430Z Brassica rapa HOM05D009096 ORTHO05D011258 1.3e-09 66.2 72 43.1
BraA03t12343Z Brassica rapa HOM05D009096 ORTHO05D011258 1.7e-09 65.9 73 45.2
BcaC01g06825 Brassica carinata HOM05D009096 ORTHO05D011258 1.4e-08 62.8 45 53.3
A03p31660 Brassica napus HOM05D009096 ORTHO05D011258 4.1e-08 61.2 75 42.7
C03p38680 Brassica napus HOM05D009096 ORTHO05D011258 4.1e-08 61.2 75 42.7
BolC3t16142H Brassica oleracea HOM05D009096 ORTHO05D011258 4.1e-08 61.2 75 42.7
BraA03t12344Z Brassica rapa HOM05D009096 ORTHO05D011258 4.1e-08 61.2 75 42.7
BcaB04g16993 Brassica carinata HOM05D008968 ORTHO05D012182 9.2e-08 60.1 78 46.2
BcaB06g28097 Brassica carinata HOM05D008968 ORTHO05D012182 4.6e-07 57.8 77 45.5
A08p00960 Brassica napus HOM05D008968 ORTHO05D012182 1.7e-06 55.8 78 44.9
BraA08t32151Z Brassica rapa HOM05D008968 ORTHO05D012182 1.7e-06 55.8 78 44.9
Sp1g40760 Schrenkiella parvula HOM05D008968 ORTHO05D012182 3.0e-06 55.1 78 43.6


User provided reference genes

Program Settings