Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 5.6e-31 137.1 77 100.0
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 5.6e-31 137.1 77 100.0
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 1.3e-30 136.0 77 98.7
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 2.1e-30 135.2 77 97.4
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 2.8e-30 134.8 77 97.4
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 2.0e-28 128.6 77 93.5
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 3.4e-28 127.9 77 92.2
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 3.4e-28 127.9 77 92.2
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 5.8e-28 127.1 77 92.2
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 1.3e-27 125.9 76 92.1
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 2.9e-27 124.8 77 88.3
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 3.8e-27 124.4 77 90.9
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 3.8e-27 124.4 77 90.9
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 6.5e-27 123.6 75 90.7
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 1.9e-26 122.1 75 89.3
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 6.0e-25 117.1 77 85.7
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.0e-24 116.3 76 85.5
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 1.0e-24 116.3 77 83.1
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 1.0e-24 116.3 77 83.1
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 1.0e-24 116.3 77 84.4
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 1.3e-24 115.9 77 84.4
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 3.9e-24 114.4 98 72.4
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 3.9e-24 114.4 77 79.2
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 3.9e-24 114.4 77 79.2
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 5.1e-24 114.0 76 81.6
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 5.1e-24 114.0 77 83.1
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 5.1e-24 114.0 77 83.1
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 5.1e-24 114.0 77 83.1
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 6.7e-24 113.6 77 81.8
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 6.7e-24 113.6 77 83.1
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 6.7e-24 113.6 77 81.8
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 6.7e-24 113.6 76 80.3
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 8.7e-24 113.2 77 83.1
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 1.1e-23 112.8 74 82.4
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 1.9e-23 112.1 76 81.6
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 1.9e-23 112.1 77 80.5
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 2.5e-23 111.7 76 84.2
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 3.3e-23 111.3 76 80.3
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 4.3e-23 110.9 77 80.5
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 4.3e-23 110.9 74 83.8
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 5.7e-23 110.5 76 78.9
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 5.7e-23 110.5 76 78.9
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 5.7e-23 110.5 76 76.3
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 7.4e-23 110.2 75 78.7
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 7.4e-23 110.2 76 77.6
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 9.6e-23 109.8 76 80.3
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 1.3e-22 109.4 102 67.6
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 1.3e-22 109.4 77 77.9
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 1.3e-22 109.4 77 77.9
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 80.3
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 77.6
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.6e-22 109.0 77 79.2
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 2.1e-22 108.6 76 75.0
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 2.1e-22 108.6 76 78.9
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 2.1e-22 108.6 76 78.9
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 2.1e-22 108.6 76 77.6
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.8e-22 108.2 76 77.6
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 3.7e-22 107.8 76 76.3
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 3.7e-22 107.8 76 77.6
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 3.7e-22 107.8 77 77.9
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 4.8e-22 107.5 76 78.9
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 4.8e-22 107.5 77 76.6
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 4.8e-22 107.5 77 76.6
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 4.8e-22 107.5 99 68.7
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 4.8e-22 107.5 77 77.9
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 4.8e-22 107.5 77 77.9
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 6.3e-22 107.1 77 71.4
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 6.3e-22 107.1 77 77.9
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 8.2e-22 106.7 64 92.2
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 8.2e-22 106.7 77 71.4
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 8.2e-22 106.7 77 74.0
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 1.1e-21 106.3 76 77.6
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 1.1e-21 106.3 77 75.3
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.4e-21 105.9 76 73.7
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.4e-21 105.9 75 77.3
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.4e-21 105.9 75 77.3
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.4e-21 105.9 75 77.3
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 1.4e-21 105.9 77 77.9
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 1.4e-21 105.9 75 77.3
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 1.8e-21 105.5 76 71.1
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 1.8e-21 105.5 76 77.6
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.8e-21 105.5 75 77.3
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 2.4e-21 105.1 77 75.3
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 2.4e-21 105.1 76 75.0
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 3.1e-21 104.8 76 72.4
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 3.1e-21 104.8 76 72.4
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 3.1e-21 104.8 77 75.3
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 3.1e-21 104.8 77 75.3
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 3.1e-21 104.8 77 75.3
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 3.1e-21 104.8 77 75.3
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 4.1e-21 104.4 77 72.7
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 5.3e-21 104.0 76 72.4
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 9.0e-21 103.2 75 76.0
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 9.0e-21 103.2 75 76.0
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 9.0e-21 103.2 76 71.1
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 9.0e-21 103.2 75 73.3
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 1.2e-20 102.8 64 89.1
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 1.2e-20 102.8 76 73.7
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 2.0e-20 102.1 76 72.4
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 2.6e-20 101.7 76 71.1
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 3.4e-20 101.3 74 74.3
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 3.4e-20 101.3 74 74.3
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 3.4e-20 101.3 75 73.3
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 3.4e-20 101.3 76 69.7
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 3.4e-20 101.3 75 72.0
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 5.9e-20 100.5 76 69.7
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 5.9e-20 100.5 76 69.7
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.3e-19 99.4 75 72.0
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 1.7e-19 99.0 77 70.1
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 1.7e-19 99.0 77 70.1
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.2e-19 98.6 64 84.4
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 6.5e-19 97.1 75 70.7
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 1.1e-18 96.3 74 71.6
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 3.6e-17 91.3 63 85.7
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 3.6e-17 91.3 77 62.3
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 6.1e-17 90.5 76 64.5
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 7.9e-17 90.1 62 79.0
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.9e-16 87.8 60 75.0
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 5.1e-16 87.4 61 73.8
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 1.1e-15 86.3 65 75.4
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 3.3e-15 84.7 96 62.5
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 9.7e-15 83.2 55 83.6
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 1.6e-14 82.4 73 63.0
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.1e-13 79.7 71 63.4
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.4e-13 79.3 63 66.7
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 2.4e-13 78.6 75 54.7
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 6.9e-13 77.0 63 68.3
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 2.0e-12 75.5 48 81.2
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 1.0e-11 73.2 47 87.2
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 2.2e-11 72.0 43 88.4
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 4.6e-09 64.3 37 91.9
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 2.2e-06 55.5 42 69.0
C01p09610 Brassica napus HOM05D000125 ORTHO05D000120 4.8e-06 54.3 46 73.9


User provided reference genes

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