Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22540 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 1.4e-41 172.6 90 100.0
AL4G16330 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 9.6e-14 80.1 41 87.8
AT2G25150 Arabidopsis thaliana HOM05D000079 ORTHO05D003781 9.6e-14 80.1 41 87.8
Sp7g27530 Schrenkiella parvula HOM05D000079 ORTHO05D003781 1.2e-13 79.7 40 90.0
BcaNung00489 Brassica carinata HOM05D000079 ORTHO05D003781 2.1e-13 79.0 40 90.0
A03p59140 Brassica napus HOM05D000079 ORTHO05D003781 6.2e-13 77.4 40 87.5
C07p57220 Brassica napus HOM05D000079 ORTHO05D003781 6.2e-13 77.4 40 87.5
BolC7t46192H Brassica oleracea HOM05D000079 ORTHO05D003781 6.2e-13 77.4 40 87.5
BraA03t14973Z Brassica rapa HOM05D000079 ORTHO05D003781 6.2e-13 77.4 40 87.5
BcaNung00487 Brassica carinata HOM05D000079 ORTHO05D003781 1.8e-12 75.9 40 87.5
A03p59110 Brassica napus HOM05D000079 ORTHO05D003781 1.8e-12 75.9 40 87.5
BraA03t14971Z Brassica rapa HOM05D000079 ORTHO05D003781 1.8e-12 75.9 40 87.5
C07p57160 Brassica napus HOM05D000079 ORTHO05D003781 2.4e-12 75.5 40 85.0
BolC7t46186H Brassica oleracea HOM05D000079 ORTHO05D003781 2.4e-12 75.5 40 85.0
A03p59050 Brassica napus HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
C07p57100 Brassica napus HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
C07p57190 Brassica napus HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
BolC7t46181H Brassica oleracea HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
BolC7t46189H Brassica oleracea HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
BraA03t14965Z Brassica rapa HOM05D000079 ORTHO05D003781 6.9e-12 73.9 40 82.5
Aa31LG2G20800 Aethionema arabicum HOM05D000079 ORTHO05D003781 9.0e-12 73.6 40 77.5
Thhalv10027408m.g Eutrema salsugineum HOM05D000079 ORTHO05D003781 3.4e-11 71.6 40 75.0
Aa31LG8G11460 Aethionema arabicum HOM05D000079 ORTHO05D003781 4.4e-11 71.2 40 77.5
BcaB03g12620 Brassica carinata HOM05D000079 ORTHO05D003781 7.6e-11 70.5 40 80.0
Aa31LG8G11450 Aethionema arabicum HOM05D000079 ORTHO05D003781 1.7e-10 69.3 40 75.0
BcaC01g01181 Brassica carinata HOM05D000079 ORTHO05D003781 8.4e-10 67.0 39 79.5
C03p89160 Brassica napus HOM05D000079 ORTHO05D003781 8.4e-10 67.0 39 79.5
BolC3t21228H Brassica oleracea HOM05D000079 ORTHO05D003781 8.4e-10 67.0 39 79.5
CARHR267230 Cardamine hirsuta HOM05D000079 ORTHO05D003781 8.4e-10 67.0 38 78.9
BcaB02g07754 Brassica carinata HOM05D000079 ORTHO05D003781 1.1e-09 66.6 39 79.5
BcaC01g01188 Brassica carinata HOM05D000079 ORTHO05D003781 1.1e-09 66.6 40 72.5
A08p19560 Brassica napus HOM05D000079 ORTHO05D003781 1.1e-09 66.6 39 76.9
C03p89100 Brassica napus HOM05D000079 ORTHO05D003781 1.1e-09 66.6 40 72.5
C03p89110 Brassica napus HOM05D000079 ORTHO05D003781 1.1e-09 66.6 40 72.5
BolC3t21222H Brassica oleracea HOM05D000079 ORTHO05D003781 1.1e-09 66.6 40 72.5
BolC3t21223H Brassica oleracea HOM05D000079 ORTHO05D003781 1.1e-09 66.6 40 72.5
BraA08t33915Z Brassica rapa HOM05D000079 ORTHO05D003781 1.1e-09 66.6 39 76.9
A09p56890 Brassica napus HOM05D000079 ORTHO05D003781 4.2e-09 64.7 44 72.7
THA.LOC104814920 Tarenaya hassleriana HOM05D000079 ORTHO05D003781 4.2e-09 64.7 41 65.9
THA.LOC104806842 Tarenaya hassleriana HOM05D000079 ORTHO05D003781 5.4e-09 64.3 38 76.3
Carub.0004s0271 Capsella rubella HOM05D000079 ORTHO05D003781 1.6e-08 62.8 44 68.2
Thhalv10026989m.g Eutrema salsugineum HOM05D000079 ORTHO05D003781 1.6e-08 62.8 37 75.7
AL4G13490 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 2.1e-08 62.4 44 68.2
AT2G23510 Arabidopsis thaliana HOM05D000079 ORTHO05D003781 2.1e-08 62.4 44 68.2
BolC8t51557H Brassica oleracea HOM05D000079 ORTHO05D003781 2.1e-08 62.4 44 70.5
Carub.0004s0272 Capsella rubella HOM05D000079 ORTHO05D003781 2.7e-08 62.0 47 63.8
Carub.0004s0273 Capsella rubella HOM05D000079 ORTHO05D003781 2.7e-08 62.0 44 68.2
Sp4g02470 Schrenkiella parvula HOM05D000079 ORTHO05D003781 2.7e-08 62.0 44 65.9
BcaB03g12618 Brassica carinata HOM05D000079 ORTHO05D003781 3.5e-08 61.6 40 65.0
BcaC07g40983 Brassica carinata HOM05D001726 ORTHO05D001761 3.5e-08 61.6 44 68.2
Lj2g0015982 Lotus japonicus HOM05D000079 ORTHO05D003781 3.5e-08 61.6 41 63.4
Lj2g0017984 Lotus japonicus HOM05D000079 ORTHO05D003781 3.5e-08 61.6 41 63.4
Lj6g0010483 Lotus japonicus HOM05D000079 ORTHO05D003781 3.5e-08 61.6 41 63.4
arahy.Tifrunner.gnm1.ann1.URW6ER Arachis hypogaea HOM05D000079 ORTHO05D003781 4.6e-08 61.2 41 61.0
arahy.Tifrunner.gnm1.ann1.Z3GTES Arachis hypogaea HOM05D000079 ORTHO05D003781 4.6e-08 61.2 41 61.0
Aa31LG6G8040 Aethionema arabicum HOM05D000079 ORTHO05D003781 6.0e-08 60.8 39 61.5
arahy.Tifrunner.gnm1.ann1.5EYZ8J Arachis hypogaea HOM05D000079 ORTHO05D003781 6.0e-08 60.8 41 63.4
A08p10680 Brassica napus HOM05D000079 ORTHO05D003781 6.0e-08 60.8 44 68.2
BraA08t33066Z Brassica rapa HOM05D000079 ORTHO05D003781 6.0e-08 60.8 44 68.2
Carub.0006s0600 Capsella rubella HOM05D000079 ORTHO05D003781 6.0e-08 60.8 39 64.1
Ca_19378_v3 Cicer arietinum L. HOM05D000079 ORTHO05D003781 6.0e-08 60.8 41 61.0
THA.LOC104819827 Tarenaya hassleriana HOM05D000079 ORTHO05D003781 6.0e-08 60.8 40 67.5
Thecc.09G359800 Theobroma cacao HOM05D000079 ORTHO05D003781 6.0e-08 60.8 70 48.6
arahy.Tifrunner.gnm1.ann1.NJP72Z Arachis hypogaea HOM05D000079 ORTHO05D003781 7.8e-08 60.5 41 63.4
Sabra19G0124200 Salix brachista HOM05D000079 ORTHO05D003781 7.8e-08 60.5 39 66.7
Sabra19G0130400 Salix brachista HOM05D000079 ORTHO05D003781 7.8e-08 60.5 39 66.7
arahy.Tifrunner.gnm1.ann1.PQ97EC Arachis hypogaea HOM05D000079 ORTHO05D003781 1.0e-07 60.1 41 63.4
arahy.Tifrunner.gnm1.ann1.W2N37L Arachis hypogaea HOM05D000079 ORTHO05D003781 1.0e-07 60.1 41 63.4
Glyma.18G056200 Glycine max HOM05D000079 ORTHO05D003781 1.0e-07 60.1 41 61.0
arahy.Tifrunner.gnm1.ann1.74R7MG Arachis hypogaea HOM05D000079 ORTHO05D003781 1.3e-07 59.7 41 61.0
Thhalv10027544m.g Eutrema salsugineum HOM05D000079 ORTHO05D003781 1.3e-07 59.7 40 67.5
Aa31LG6G8080 Aethionema arabicum HOM05D000079 ORTHO05D003781 1.7e-07 59.3 39 59.0
BcaC07g37769 Brassica carinata HOM05D000079 ORTHO05D003781 1.7e-07 59.3 44 65.9
BolC8t48155H Brassica oleracea HOM05D000079 ORTHO05D003781 1.7e-07 59.3 44 65.9
Duzib106G0313 Durio zibethinus HOM05D000079 ORTHO05D003781 1.7e-07 59.3 44 61.4
C08p39850 Brassica napus HOM05D000079 ORTHO05D003781 2.3e-07 58.9 44 68.2
CANSAT54G2083 Cannabis sativa HOM05D000079 ORTHO05D003781 2.3e-07 58.9 39 64.1
Potri.019G126400 Populus trichocarpa HOM05D000079 ORTHO05D003781 2.3e-07 58.9 39 64.1
AL7G22530 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 3.0e-07 58.5 40 67.5
AT5G07080 Arabidopsis thaliana HOM05D000079 ORTHO05D003781 3.9e-07 58.2 39 59.0
CSS0002575 Camellia sinensis var. sinensis HOM05D000079 ORTHO05D003781 3.9e-07 58.2 40 62.5
CARHR206060 Cardamine hirsuta HOM05D000079 ORTHO05D003781 3.9e-07 58.2 39 61.5
Phvul.006G075000 Phaseolus vulgaris HOM05D000079 ORTHO05D003781 3.9e-07 58.2 41 58.5
Sp7g27570 Schrenkiella parvula HOM05D000079 ORTHO05D003781 5.1e-07 57.8 40 65.0
TAR623G0994 Trochodendron aralioides HOM05D000079 ORTHO05D003781 5.1e-07 57.8 39 66.7
arahy.Tifrunner.gnm1.ann1.A8RKBJ Arachis hypogaea HOM05D000079 ORTHO05D003781 8.7e-07 57.0 41 61.0
BcaNung04196 Brassica carinata HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
A10p28880 Brassica napus HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
C09p69230 Brassica napus HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
BolC9t59667H Brassica oleracea HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
BraA10t44935Z Brassica rapa HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
CARHR206070 Cardamine hirsuta HOM05D000079 ORTHO05D003781 8.7e-07 57.0 39 59.0
Thhalv10027311m.g Eutrema salsugineum HOM05D000079 ORTHO05D003781 8.7e-07 57.0 40 65.0
Psat7g190240 Pisum sativum HOM05D000079 ORTHO05D003781 8.7e-07 57.0 41 61.0
VMungo0540G2087 Vigna mungo HOM05D000079 ORTHO05D003781 8.7e-07 57.0 41 58.5
Thhalv10013522m.g Eutrema salsugineum HOM05D000079 ORTHO05D003781 1.1e-06 56.6 39 59.0
Atru.chr4.464 Acer truncatum HOM05D000079 ORTHO05D003781 1.5e-06 56.2 39 61.5
AL6G17250 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 1.5e-06 56.2 39 56.4
BcaB05g22580 Brassica carinata HOM05D000079 ORTHO05D003781 1.5e-06 56.2 44 63.6
Sp5g14590 Schrenkiella parvula HOM05D000079 ORTHO05D003781 1.5e-06 56.2 39 59.0
arahy.Tifrunner.gnm1.ann1.B1JCFK Arachis hypogaea HOM05D000079 ORTHO05D003781 1.9e-06 55.8 40 67.5
BcaB04g18170 Brassica carinata HOM05D000079 ORTHO05D003781 1.9e-06 55.8 44 63.6
Gohir.D03G143900 Gossypium hirsutum HOM05D000079 ORTHO05D003781 1.9e-06 55.8 36 63.9
Gorai.003G151200 Gossypium raimondii HOM05D000079 ORTHO05D003781 1.9e-06 55.8 36 63.9
Aa31LG7G13360 Aethionema arabicum HOM05D000079 ORTHO05D003781 2.5e-06 55.5 44 61.4
Aa31LG7G13390 Aethionema arabicum HOM05D000079 ORTHO05D003781 2.5e-06 55.5 44 59.1
BcaC06g32516 Brassica carinata HOM05D000079 ORTHO05D003781 2.5e-06 55.5 39 56.4
BcaC06g32517 Brassica carinata HOM05D000079 ORTHO05D003781 2.5e-06 55.5 39 56.4
Cpa.g.sc2.333 Carica papaya HOM05D000079 ORTHO05D003781 2.5e-06 55.5 35 71.4
arahy.Tifrunner.gnm1.ann1.46PQYR Arachis hypogaea HOM05D000079 ORTHO05D003781 3.3e-06 55.1 42 59.5
Cpa.g.sc2.334 Carica papaya HOM05D000079 ORTHO05D003781 3.3e-06 55.1 39 56.4
Gohir.A03G024600 Gossypium hirsutum HOM05D000079 ORTHO05D003781 3.3e-06 55.1 36 63.9
Sp6g35790 Schrenkiella parvula HOM05D000079 ORTHO05D003781 3.3e-06 55.1 39 59.0
arahy.Tifrunner.gnm1.ann1.SVL2MX Arachis hypogaea HOM05D000079 ORTHO05D003781 4.3e-06 54.7 41 58.5
TPR.G15583 Trifolium pratense HOM05D000079 ORTHO05D003781 4.3e-06 54.7 41 58.5
Lalb_Chr18g0051471 Lupinus albus HOM05D000079 ORTHO05D003781 5.6e-06 54.3 39 59.0
Aqoxy2G00757 Aquilegia oxysepala HOM05D000079 ORTHO05D003781 7.3e-06 53.9 39 61.5
BcaC02g08142 Brassica carinata HOM05D000079 ORTHO05D003781 7.3e-06 53.9 39 56.4
BolC4t27317H Brassica oleracea HOM05D000079 ORTHO05D003781 7.3e-06 53.9 39 56.4
AL5G26430 Arabidopsis lyrata HOM05D000079 ORTHO05D003781 9.6e-06 53.5 38 57.9


User provided reference genes

Program Settings