Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 6.5e-88 327.4 171 100.0
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.7e-83 312.8 171 95.9
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 2.5e-71 272.3 165 87.3
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 4.1e-66 255.0 167 82.6
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 7.8e-57 224.2 167 74.3
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 7.8e-57 224.2 167 74.3
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.0e-56 223.8 171 72.5
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.3e-56 222.6 174 73.6
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 1.8e-53 213.0 167 70.1
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 1.8e-53 213.0 167 70.1
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 2.0e-52 209.5 172 70.3
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 4.8e-38 161.8 177 53.7
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 2.2e-35 152.9 175 50.9
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 2.9e-35 152.5 175 50.9
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 3.8e-35 152.1 177 50.8
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 3.8e-35 152.1 175 50.9
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 3.8e-35 152.1 175 50.9
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 4.9e-35 151.8 175 51.4
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.4e-34 148.3 177 49.7
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 7.1e-34 147.9 172 47.7
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 4.6e-33 145.2 180 48.3
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.1e-32 141.7 179 47.5
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 2.8e-30 136.0 156 46.2
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 1.8e-29 133.3 178 45.5
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 1.2e-28 130.6 173 46.2
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 2.6e-28 129.4 172 46.5
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 3.4e-28 129.0 172 46.5
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.3e-27 127.1 167 46.1
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 3.8e-27 125.6 172 45.3
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 8.4e-27 124.4 164 44.5
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 1.1e-26 124.0 172 45.3
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 2.5e-23 112.8 160 41.9
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 4.0e-21 105.5 164 37.8
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.2e-20 104.0 145 43.4
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.0e-20 103.2 131 43.5
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 2.6e-20 102.8 145 40.7
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 3.4e-20 102.4 159 36.5
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 3.4e-20 102.4 143 42.7
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 1.0e-19 100.9 148 37.8
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 1.7e-19 100.1 135 40.7
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 1.7e-19 100.1 139 38.8
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 3.8e-19 99.0 164 37.2
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 4.9e-19 98.6 135 41.5
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 8.4e-19 97.8 128 42.2
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.5e-18 96.3 152 37.5
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 2.5e-18 96.3 152 37.5
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.5e-18 96.3 135 40.7
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 4.2e-18 95.5 177 39.5
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 9.3e-18 94.4 164 36.6
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 9.3e-18 94.4 152 36.8
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.2e-17 94.0 163 36.2
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 1.6e-17 93.6 147 34.7
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 2.1e-17 93.2 164 36.6
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 2.1e-17 93.2 133 39.1
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 2.1e-17 93.2 150 34.0
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 2.7e-17 92.8 128 42.2
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 3.5e-17 92.4 129 40.3
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 3.5e-17 92.4 146 34.2
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 4.6e-17 92.0 128 42.2
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 6.0e-17 91.7 133 38.3
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 7.9e-17 91.3 133 39.1
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 7.9e-17 91.3 157 35.7
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 7.9e-17 91.3 136 39.0
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 1.0e-16 90.9 143 37.8
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 1.0e-16 90.9 128 39.8
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 3.9e-16 89.0 126 38.1
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 5.1e-16 88.6 134 35.8
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 6.7e-16 88.2 145 37.2
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 1.1e-15 87.4 145 35.9
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 1.9e-15 86.7 144 31.9
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.5e-15 86.3 142 34.5
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 3.3e-15 85.9 138 36.2
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 3.3e-15 85.9 129 39.5
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 7.4e-15 84.7 100 41.0
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 7.4e-15 84.7 142 33.8
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 9.6e-15 84.3 143 35.0
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-14 84.0 138 31.2
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 1.3e-14 84.0 160 38.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.6e-14 83.6 150 34.0
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 2.1e-14 83.2 65 60.0
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 2.8e-14 82.8 65 61.5
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.8e-14 82.8 134 33.6
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 3.7e-14 82.4 170 32.4
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.7e-14 82.4 143 32.9
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 3.7e-14 82.4 191 32.5
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.8e-14 82.0 134 34.3
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 4.8e-14 82.0 138 33.3
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 6.2e-14 81.6 138 38.4
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.4e-13 80.5 151 33.8
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 4.1e-13 79.0 138 33.3
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.2e-12 77.4 101 44.6
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 1.2e-12 77.4 105 39.0
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.5e-12 77.0 144 34.0
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.0e-12 76.6 88 42.0
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 2.6e-12 76.3 149 28.2
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 3.4e-12 75.9 164 31.7
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.4e-12 75.9 88 40.9
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 4.5e-12 75.5 100 39.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 5.8e-12 75.1 100 39.0
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.0e-11 74.3 170 32.4
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.9e-11 72.8 144 36.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 1.1e-10 70.9 180 30.0
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 1.9e-10 70.1 164 29.9
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.9e-10 70.1 77 46.8
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 4.2e-10 68.9 80 40.0
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.6e-09 65.5 111 36.0
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 6.1e-09 65.1 53 58.5
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.3e-08 63.2 171 32.2
C09p04090 Brassica napus HOM05D005423 ORTHO05D006223 8.7e-08 61.2 49 57.1
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.1e-07 60.8 163 31.3
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 1.5e-07 60.5 77 37.7
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 2.5e-07 59.7 95 37.9
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 4.3e-07 58.9 98 35.7
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 2.8e-06 56.2 65 41.5
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 4.8e-06 55.5 97 37.1


User provided reference genes

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