Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G22010 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 7.4e-78 293.9 157 100.0
Carub.0007s1043 Capsella rubella HOM05D007765 ORTHO05D009826 2.6e-67 258.8 158 89.2
Thhalv10026906m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 3.5e-64 248.4 160 87.5
AT4G30180 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 1.3e-63 246.5 157 87.3
CARHR238080 Cardamine hirsuta HOM05D007765 ORTHO05D009826 4.3e-62 241.5 160 84.4
BcaNung04419 Brassica carinata HOM05D007765 ORTHO05D009826 2.8e-61 238.8 162 84.6
BcaB03g12635 Brassica carinata HOM05D007765 ORTHO05D009826 1.6e-56 223.0 160 80.6
Sp7g28050 Schrenkiella parvula HOM05D007765 ORTHO05D009826 3.9e-55 218.4 161 79.5
BcaC09g51800 Brassica carinata HOM05D007765 ORTHO05D009826 7.4e-54 214.2 161 79.5
C01p08880 Brassica napus HOM05D007765 ORTHO05D009826 7.4e-54 214.2 161 79.5
BolC1t00878H Brassica oleracea HOM05D007765 ORTHO05D009826 7.4e-54 214.2 161 79.5
A01p07960 Brassica napus HOM05D007765 ORTHO05D009826 2.2e-53 212.6 161 78.3
BraA01t00741Z Brassica rapa HOM05D007765 ORTHO05D009826 3.7e-53 211.8 161 77.6
AL3G52940 Arabidopsis lyrata HOM05D007765 ORTHO05D009826 2.5e-49 199.1 173 64.7
AT2G18969 Arabidopsis thaliana HOM05D007765 ORTHO05D009826 2.5e-49 199.1 173 65.9
A08p19380 Brassica napus HOM05D007765 ORTHO05D009826 4.2e-49 198.4 160 73.8
BraA08t33899Z Brassica rapa HOM05D007765 ORTHO05D009826 4.2e-49 198.4 160 73.8
C03p88840 Brassica napus HOM05D007765 ORTHO05D009826 1.4e-47 193.4 160 71.9
BolC3t21196H Brassica oleracea HOM05D007765 ORTHO05D009826 1.4e-47 193.4 160 71.9
Sp3g32420 Schrenkiella parvula HOM05D007765 ORTHO05D009826 2.3e-47 192.6 165 67.3
Thhalv10022885m.g Eutrema salsugineum HOM05D007765 ORTHO05D009826 1.3e-45 186.8 165 65.5
BolC9t54340H Brassica oleracea HOM05D007765 ORTHO05D009826 6.3e-45 184.5 165 63.0
Carub.0003s3320 Capsella rubella HOM05D007765 ORTHO05D009826 6.3e-45 184.5 171 61.4
A09p12150 Brassica napus HOM05D007765 ORTHO05D009826 1.8e-44 183.0 165 62.4
C09p14370 Brassica napus HOM05D007765 ORTHO05D009826 1.8e-44 183.0 165 62.4
BraA09t36859Z Brassica rapa HOM05D007765 ORTHO05D009826 1.8e-44 183.0 165 62.4
BcaC04g22872 Brassica carinata HOM05D007765 ORTHO05D009826 5.3e-44 181.4 165 62.4
CARHR109510 Cardamine hirsuta HOM05D007765 ORTHO05D009826 2.0e-43 179.5 174 60.3
THA.LOC104803946 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 7.7e-43 177.6 173 60.1
BcaB07g31628 Brassica carinata HOM05D007765 ORTHO05D009826 1.0e-42 177.2 164 62.2
THA.LOC104819971 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 1.3e-42 176.8 169 61.5
THA.LOC104803486 Tarenaya hassleriana HOM05D007765 ORTHO05D009826 5.2e-31 138.3 172 51.7
BcaC04g20459 Brassica carinata HOM05D007765 ORTHO05D009826 4.0e-23 112.1 82 75.6
TPR.G5381 Trifolium pratense HOM05D007765 ORTHO05D009826 2.6e-22 109.4 161 41.0
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 4.8e-21 105.1 147 43.5
arahy.Tifrunner.gnm1.ann1.8SXC5S Arachis hypogaea HOM05D007765 ORTHO05D009826 1.2e-19 100.5 154 40.9
BcaB03g16695 Brassica carinata HOM05D007765 ORTHO05D009826 2.7e-19 99.4 99 57.6
Medtr4g127700 Medicago truncatula HOM05D007765 ORTHO05D009826 2.7e-19 99.4 147 42.9
Dinv41219 Davidia involucrata HOM05D007765 ORTHO05D009826 4.5e-19 98.6 194 37.6
BcaC06g36508 Brassica carinata HOM05D007765 ORTHO05D009826 1.7e-18 96.7 96 57.3
QL11p005142 Quercus lobata HOM05D007765 ORTHO05D009826 1.7e-18 96.7 206 33.5
Aa31LG8G16060 Aethionema arabicum HOM05D007765 ORTHO05D009826 5.0e-18 95.1 158 42.4
Gohir.D13G216400 Gossypium hirsutum HOM05D007765 ORTHO05D009826 8.6e-18 94.4 157 40.8
CiPaw.07G194200 Carya illinoinensis HOM05D007765 ORTHO05D009826 1.5e-17 93.6 224 33.9
Gohir.A13G212300 Gossypium hirsutum HOM05D007765 ORTHO05D009826 1.5e-17 93.6 157 41.4
Gorai.013G246700 Gossypium raimondii HOM05D007765 ORTHO05D009826 2.5e-17 92.8 157 40.8
TPR.G9240 Trifolium pratense HOM05D007765 ORTHO05D009826 2.8e-16 89.4 169 39.1
Lalb_Chr18g0052451 Lupinus albus HOM05D007765 ORTHO05D009826 3.6e-16 89.0 171 37.4
Medtr2g036670 Medicago truncatula HOM05D007765 ORTHO05D009826 4.7e-16 88.6 172 33.1
TAR383G0713 Trochodendron aralioides HOM05D007765 ORTHO05D009826 6.1e-16 88.2 214 34.6
Lalb_Chr12g0199471 Lupinus albus HOM05D007765 ORTHO05D009826 8.0e-16 87.8 175 37.7
Phvul.009G238800 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 1.0e-15 87.4 186 34.4
Glyma.17G061700 Glycine max HOM05D007765 ORTHO05D009826 3.0e-15 85.9 205 34.1
Lj6g0023329 Lotus japonicus HOM05D007765 ORTHO05D009826 4.0e-15 85.5 171 36.3
Atru.chr7.847 Acer truncatum HOM05D007765 ORTHO05D009826 5.2e-15 85.1 199 33.2
Phvul.003G143700 Phaseolus vulgaris HOM05D007765 ORTHO05D009826 5.2e-15 85.1 205 34.6
Lj4g0004123 Lotus japonicus HOM05D007765 ORTHO05D009826 6.8e-15 84.7 200 33.0
VMungo1309G2639 Vigna mungo HOM05D007765 ORTHO05D009826 1.2e-14 84.0 184 34.2
Glyma.15G162800 Glycine max HOM05D007765 ORTHO05D009826 2.0e-14 83.2 186 34.4
Potri.018G090200 Populus trichocarpa HOM05D007765 ORTHO05D009826 4.4e-14 82.0 210 31.9
Glyma.13G098000 Glycine max HOM05D007765 ORTHO05D009826 7.5e-14 81.3 197 32.5
arahy.Tifrunner.gnm1.ann1.YM1G3Q Arachis hypogaea HOM05D007765 ORTHO05D009826 1.3e-13 80.5 175 36.6
Sed0013776 Sechium edule HOM05D007765 ORTHO05D009826 1.3e-13 80.5 166 33.7
Glyma.09G056600 Glycine max HOM05D007765 ORTHO05D009826 1.7e-13 80.1 199 31.7
Lalb_Chr20g0116301 Lupinus albus HOM05D007765 ORTHO05D009826 1.7e-13 80.1 207 33.3
FAN22G0698 Fragaria x ananassa HOM05D007765 ORTHO05D009826 2.8e-13 79.3 204 33.3
Sabra18G0077700 Salix brachista HOM05D007765 ORTHO05D009826 2.8e-13 79.3 212 30.2
FAN12G2617 Fragaria x ananassa HOM05D007765 ORTHO05D009826 6.3e-13 78.2 206 32.5
CsaV3_2G008530 Cucumis sativus L. HOM05D007765 ORTHO05D009826 1.4e-12 77.0 180 29.4
FvH4_4g07800 Fragaria vesca HOM05D007765 ORTHO05D009826 3.1e-12 75.9 206 32.5
Prupe.1G081900 Prunus persica HOM05D007765 ORTHO05D009826 7.0e-12 74.7 197 34.0
RcHm_v2.0_Chr4g0400891 Rosa chinensis HOM05D007765 ORTHO05D009826 9.2e-12 74.3 202 31.2
COL.COLO4_36375 Corchorus olitorius HOM05D007765 ORTHO05D009826 1.2e-11 73.9 193 33.7
Duzib150G0923 Durio zibethinus HOM05D007765 ORTHO05D009826 1.2e-11 73.9 219 32.4
ClCG11G011990 Citrullus lanatus HOM05D007765 ORTHO05D009826 2.7e-11 72.8 191 30.9
FAN07G1496 Fragaria x ananassa HOM05D007765 ORTHO05D009826 2.7e-11 72.8 204 31.9
Dinv19560 Davidia involucrata HOM05D007765 ORTHO05D009826 3.5e-11 72.4 194 30.9
FAN17G2229 Fragaria x ananassa HOM05D007765 ORTHO05D009826 5.9e-11 71.6 205 31.7
Psat1g146600 Pisum sativum HOM05D007765 ORTHO05D009826 5.0e-10 68.6 77 48.1
MBI14_g08141_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 6.6e-10 68.2 224 28.6
MBI16_g38085_MAGBIO Magnolia biondii HOM05D007765 ORTHO05D009826 3.3e-09 65.9 192 28.6
THA.LOC104804916 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.7e-08 62.0 47 66.0
PSO170G3972 Papaver somniferum HOM05D007765 ORTHO05D009826 6.8e-07 58.2 228 27.2
VMungo1215G1692 Vigna mungo HOM05D007765 ORTHO05D009826 1.5e-06 57.0 153 30.1
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 2.6e-06 56.2 144 29.2
PSO063G6075 Papaver somniferum HOM05D007765 ORTHO05D009826 3.4e-06 55.8 228 26.8


User provided reference genes

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