Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 8.1e-129 463.8 238 100.0
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 8.5e-110 400.6 239 88.3
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 1.4e-83 313.5 239 72.4
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.2e-82 310.5 240 72.5
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 8.2e-81 304.3 228 71.1
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 8.8e-75 284.3 202 74.3
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 5.8e-58 228.4 229 62.0
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.1e-56 224.2 232 62.5
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 2.6e-50 203.0 244 52.0
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 2.4e-48 196.4 230 55.2
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 7.0e-48 194.9 230 54.8
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 1.0e-46 191.0 230 53.9
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 3.0e-46 189.5 229 55.5
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 3.0e-46 189.5 229 56.3
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 3.0e-46 189.5 230 54.8
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 3.0e-46 189.5 229 56.3
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 8.6e-46 188.0 230 53.5
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.9e-45 186.8 247 47.4
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 5.6e-45 185.3 229 54.6
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 5.6e-45 185.3 229 54.6
Aa31LG2G19870 Aethionema arabicum HOM05D003759 ORTHO05D004149 1.4e-32 144.1 238 42.4
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 4.4e-26 122.5 244 38.1
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 8.1e-20 101.7 237 34.6
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 2.4e-19 100.1 234 35.5
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 3.1e-19 99.8 231 34.6
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 3.1e-19 99.8 274 31.4
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 1.5e-18 97.4 261 34.5
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.0e-18 97.1 231 34.2
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 7.6e-18 95.1 273 31.9
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 1.7e-17 94.0 234 32.5
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 2.9e-17 93.2 229 32.8
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 2.9e-17 93.2 234 34.6
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 1.1e-16 91.3 237 34.2
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 1.1e-16 91.3 249 34.1
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 2.4e-16 90.1 231 33.3
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 4.2e-16 89.4 271 31.7
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 7.1e-16 88.6 231 35.1
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 9.3e-16 88.2 249 32.9
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 1.2e-15 87.8 229 32.8
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.1e-15 87.0 272 30.5
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 2.7e-15 86.7 233 34.8
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 3.5e-15 86.3 240 36.2
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 4.6e-15 85.9 231 34.2
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 6.0e-15 85.5 246 33.3
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 1.8e-14 84.0 234 35.5
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 1.8e-14 84.0 247 30.4
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 2.3e-14 83.6 230 36.1
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 3.0e-14 83.2 230 32.2
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 3.0e-14 83.2 237 33.3
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 8.7e-14 81.6 247 30.8
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 1.5e-13 80.9 226 33.2
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.5e-13 80.9 295 29.5
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 1.9e-13 80.5 249 32.9
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 2.5e-13 80.1 255 29.4
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 3.3e-13 79.7 229 34.1
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 3.3e-13 79.7 239 33.9
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 4.3e-13 79.3 223 31.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 5.6e-13 79.0 247 33.2
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 7.4e-13 78.6 240 35.0
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 7.4e-13 78.6 229 33.6
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 7.4e-13 78.6 243 32.9
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.4e-13 78.6 228 31.6
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 9.6e-13 78.2 239 34.3
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 9.6e-13 78.2 239 34.3
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 9.6e-13 78.2 240 35.0
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 9.6e-13 78.2 239 34.3
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 9.6e-13 78.2 243 33.3
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.3e-12 77.8 231 32.9
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 1.3e-12 77.8 283 30.4
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 1.6e-12 77.4 237 33.3
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.6e-12 77.4 271 31.7
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 2.1e-12 77.0 228 32.9
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 2.1e-12 77.0 228 32.9
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 2.1e-12 77.0 241 33.2
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 2.1e-12 77.0 208 30.8
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.8e-12 76.6 251 28.3
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.8e-12 76.6 219 32.0
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 3.7e-12 76.3 241 30.3
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 4.8e-12 75.9 233 29.2
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 6.2e-12 75.5 269 27.5
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 8.1e-12 75.1 236 29.7
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 1.1e-11 74.7 232 31.9
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 1.1e-11 74.7 238 33.2
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.4e-11 74.3 215 34.0
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 2.4e-11 73.6 266 29.3
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 2.4e-11 73.6 226 32.3
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 4.0e-11 72.8 317 26.5
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 4.0e-11 72.8 231 29.9
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 5.3e-11 72.4 272 28.3
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 5.3e-11 72.4 270 28.5
BcaB01g04466 Brassica carinata HOM05D003759 ORTHO05D004149 6.9e-11 72.0 219 31.1
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.2e-10 71.2 261 30.3
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.2e-10 71.2 229 30.1
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.2e-10 71.2 231 31.2
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 1.5e-10 70.9 239 30.5
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 1.5e-10 70.9 233 29.6
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.5e-10 70.9 276 27.9
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.5e-10 70.9 194 30.9
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.0e-10 70.5 227 32.2
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.6e-10 70.1 265 30.9
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.6e-10 70.1 229 30.1
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 4.5e-10 69.3 275 27.3
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 4.5e-10 69.3 269 29.0
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 5.8e-10 68.9 230 29.6
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 1.3e-09 67.8 256 28.5
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.3e-09 67.8 108 44.4
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 1.3e-09 67.8 225 29.8
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.7e-09 67.4 279 28.3
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 2.2e-09 67.0 240 33.3
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.2e-09 67.0 234 27.4
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 2.2e-09 67.0 234 27.4
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 2.2e-09 67.0 242 28.5
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 2.9e-09 66.6 210 31.0
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 2.9e-09 66.6 241 27.8
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 4.9e-09 65.9 233 27.5
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 4.9e-09 65.9 234 29.9
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.1e-08 64.7 238 28.2
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.4e-08 64.3 240 27.1
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 1.4e-08 64.3 282 28.7
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 1.9e-08 63.9 233 31.8
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.9e-08 63.9 258 26.4
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 1.9e-08 63.9 263 25.9
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 2.5e-08 63.5 106 43.4
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 3.2e-08 63.2 223 31.4
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 3.2e-08 63.2 225 29.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 4.2e-08 62.8 226 29.2
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 4.2e-08 62.8 246 28.0
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.1e-08 62.0 238 26.9
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 7.1e-08 62.0 238 26.9
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 7.1e-08 62.0 273 25.3
Aqoxy7G03381 Aquilegia oxysepala HOM05D003759 ORTHO05D004149 1.6e-07 60.8 229 27.9
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.1e-07 60.5 279 28.0
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 3.5e-07 59.7 270 30.0
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 3.5e-07 59.7 299 25.1
unitig_748.g7198 Utricularia gibba HOM05D003759 ORTHO05D004149 3.5e-07 59.7 266 27.1
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 6.0e-07 58.9 241 27.8
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 7.9e-07 58.5 77 42.9
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 7.9e-07 58.5 233 26.2
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 7.9e-07 58.5 110 38.2
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 7.9e-07 58.5 110 38.2
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 1.8e-06 57.4 231 28.1
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 1.8e-06 57.4 213 27.2
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 2.3e-06 57.0 232 28.0
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 2.3e-06 57.0 249 27.3
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 2.3e-06 57.0 222 29.3
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 3.0e-06 56.6 232 27.6
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 5.1e-06 55.8 209 25.8
HanXRQChr09g0244571 Helianthus annuus HOM05D003759 ORTHO05D004149 5.1e-06 55.8 153 30.7
unitig_0.g2686 Utricularia gibba HOM05D003759 ORTHO05D004149 5.1e-06 55.8 238 27.7
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 6.7e-06 55.5 252 27.4
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 8.7e-06 55.1 272 27.6
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 8.7e-06 55.1 228 27.6


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