Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G21370 Arabidopsis lyrata HOM05D001418 ORTHO05D003753 2.2e-82 308.9 158 100.0
AT4G30770 Arabidopsis thaliana HOM05D001418 ORTHO05D003753 1.1e-78 296.6 158 96.2
CARHR238610 Cardamine hirsuta HOM05D001418 ORTHO05D003753 2.2e-77 292.4 158 95.6
Thhalv10027257m.g Eutrema salsugineum HOM05D001418 ORTHO05D003753 4.5e-75 284.6 158 91.1
Sp7g28640 Schrenkiella parvula HOM05D001418 ORTHO05D003753 7.7e-75 283.9 158 91.1
Carub.0007s0979 Capsella rubella HOM05D001418 ORTHO05D003753 2.7e-72 275.4 162 87.7
BcaNung04827 Brassica carinata HOM05D001418 ORTHO05D003753 2.2e-69 265.8 158 84.8
C07p58200 Brassica napus HOM05D001418 ORTHO05D003753 6.3e-69 264.2 158 85.4
BraA03t15071Z Brassica rapa HOM05D001418 ORTHO05D003753 6.3e-69 264.2 158 85.4
BolC7t46274H Brassica oleracea HOM05D001418 ORTHO05D002038 8.2e-69 263.8 157 85.4
A03p60290 Brassica napus HOM05D001418 ORTHO05D003753 1.4e-68 263.1 158 84.8
BcaNung01562 Brassica carinata HOM05D001418 ORTHO05D003753 1.8e-68 262.7 158 84.8
BcaNung02743 Brassica carinata HOM05D001418 ORTHO05D003753 2.4e-68 262.3 158 84.8
BcaC09g51866 Brassica carinata HOM05D001418 ORTHO05D003753 1.2e-67 260.0 158 82.9
BolC1t00803H Brassica oleracea HOM05D001418 ORTHO05D003753 1.2e-67 260.0 158 82.9
A01p07400 Brassica napus HOM05D001418 ORTHO05D003753 2.0e-67 259.2 158 82.9
BraA01t00689Z Brassica rapa HOM05D001418 ORTHO05D003753 2.0e-67 259.2 158 82.9
C01p08160 Brassica napus HOM05D001418 ORTHO05D003753 2.6e-67 258.8 158 82.3
BcaB03g12658 Brassica carinata HOM05D001418 ORTHO05D003753 1.3e-61 240.0 158 81.0
BcaC01g01138 Brassica carinata HOM05D001418 ORTHO05D003753 1.8e-60 236.1 158 79.7
C03p88500 Brassica napus HOM05D001418 ORTHO05D003753 1.8e-60 236.1 158 79.7
BolC3t21160H Brassica oleracea HOM05D001418 ORTHO05D003753 1.8e-60 236.1 158 79.7
A08p19100 Brassica napus HOM05D001418 ORTHO05D003753 1.8e-55 219.5 146 79.5
BraA08t33872Z Brassica rapa HOM05D001418 ORTHO05D003753 1.8e-55 219.5 146 79.5
THA.LOC104804459 Tarenaya hassleriana HOM05D001418 ORTHO05D003753 3.6e-48 195.3 158 64.6
THA.LOC104804402 Tarenaya hassleriana HOM05D001418 ORTHO05D003753 3.0e-47 192.2 161 64.6
Cpa.g.sc1441.4 Carica papaya HOM05D001418 ORTHO05D003753 2.4e-28 129.4 188 41.5
CANSAT01G1075 Cannabis sativa HOM05D001418 ORTHO05D003753 1.3e-21 107.1 198 38.4
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 2.9e-21 105.9 188 41.0
MD00G1091900 Malus domestica HOM05D001418 ORTHO05D003753 1.9e-20 103.2 164 43.9
MELO3C023225.2 Cucumis melo HOM05D001418 ORTHO05D003753 2.4e-20 102.8 165 41.2
Sabra07G0084500 Salix brachista HOM05D001418 ORTHO05D003753 3.2e-20 102.4 186 39.2
CiPaw.04G080200 Carya illinoinensis HOM05D001418 ORTHO05D003753 1.2e-19 100.5 198 37.9
Duzib187G1961 Durio zibethinus HOM05D001418 ORTHO05D003753 1.2e-19 100.5 180 41.7
CsaV3_2G019490 Cucumis sativus L. HOM05D001418 ORTHO05D003753 4.6e-19 98.6 160 40.0
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 4.6e-19 98.6 166 40.4
Duzib264G0973 Durio zibethinus HOM05D001418 ORTHO05D003753 6.0e-19 98.2 179 41.9
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 6.0e-19 98.2 182 40.7
Phvul.002G274200 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 2.3e-18 96.3 161 37.9
Prupe.4G274100 Prunus persica HOM05D001418 ORTHO05D003753 1.9e-17 93.2 170 42.9
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 3.3e-17 92.4 158 39.9
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 9.5e-17 90.9 166 39.8
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 1.6e-16 90.1 181 36.5
Potri.005G066500 Populus trichocarpa HOM05D001418 ORTHO05D003753 1.6e-16 90.1 178 37.6
ClCG02G000350 Citrullus lanatus HOM05D001418 ORTHO05D003753 2.1e-16 89.7 160 40.0
CiPaw.03G118600 Carya illinoinensis HOM05D001418 ORTHO05D003753 2.8e-16 89.4 193 37.8
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 3.6e-16 89.0 178 41.0
Sed0004234 Sechium edule HOM05D001418 ORTHO05D003753 4.7e-16 88.6 165 43.6
Sabra05G0054800 Salix brachista HOM05D001418 ORTHO05D003753 1.1e-15 87.4 82 51.2
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 1.4e-15 87.0 163 37.4
Gohir.D09G004300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 3.1e-15 85.9 165 38.2
Lj4g0007966 Lotus japonicus HOM05D001418 ORTHO05D003753 4.0e-15 85.5 160 38.1
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 4.0e-15 85.5 157 38.9
Gohir.A10G157222 Gossypium hirsutum HOM05D001418 ORTHO05D003753 5.2e-15 85.1 176 37.5
Glyma.04G210600 Glycine max HOM05D001418 ORTHO05D003753 6.8e-15 84.7 99 45.5
Gohir.D10G108200 Gossypium hirsutum HOM05D001418 ORTHO05D003753 8.9e-15 84.3 176 37.5
Glyma.08G001800 Glycine max HOM05D001418 ORTHO05D003753 1.2e-14 84.0 161 37.9
Cfa021634 Carpinus fangiana HOM05D001418 ORTHO05D003753 1.5e-14 83.6 193 32.6
Cfa021635 Carpinus fangiana HOM05D001418 ORTHO05D003753 1.5e-14 83.6 193 32.6
Sed0024034 Sechium edule HOM05D001418 ORTHO05D003753 1.5e-14 83.6 165 38.8
VMungo0251G3540 Vigna mungo HOM05D001418 ORTHO05D003753 2.0e-14 83.2 157 35.7
Gohir.A09G005000 Gossypium hirsutum HOM05D001418 ORTHO05D003753 4.4e-14 82.0 158 38.6
QL10p041870 Quercus lobata HOM05D001418 ORTHO05D003753 5.8e-14 81.6 197 33.5
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 9.8e-14 80.9 169 37.3
Gorai.011G118700 Gossypium raimondii HOM05D001418 ORTHO05D003753 9.8e-14 80.9 176 37.5
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 9.8e-14 80.9 84 45.2
QL10p041669 Quercus lobata HOM05D001418 ORTHO05D003753 9.8e-14 80.9 196 33.2
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 9.8e-14 80.9 163 40.5
FvH4_1g24680 Fragaria vesca HOM05D001418 ORTHO05D003753 1.3e-13 80.5 103 47.6
FAN19G0125 Fragaria x ananassa HOM05D001418 ORTHO05D003753 1.3e-13 80.5 103 47.6
Glyma.06G155400 Glycine max HOM05D001418 ORTHO05D003753 1.3e-13 80.5 161 36.0
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 1.7e-13 80.1 77 55.8
Gorai.006G005900 Gossypium raimondii HOM05D001418 ORTHO05D003753 2.2e-13 79.7 165 38.8
Ciclev10003211m.g Citrus clementina HOM05D001418 ORTHO05D003753 4.9e-13 78.6 81 53.1
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 4.9e-13 78.6 161 36.0
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 1.1e-12 77.4 161 37.9
Haze_25311 Corylus avellana HOM05D001418 ORTHO05D003753 2.4e-12 76.3 197 31.5
FAN26G3393 Fragaria x ananassa HOM05D001418 ORTHO05D003753 2.4e-12 76.3 101 46.5
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 2.4e-12 76.3 91 47.3
Haze_18313 Corylus avellana HOM05D001418 ORTHO05D003753 1.6e-11 73.6 195 30.3
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 2.1e-11 73.2 93 45.2
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 2.1e-11 73.2 93 45.2
Gohir.D11G061300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 4.6e-11 72.0 94 43.6
arahy.Tifrunner.gnm1.ann1.QAD3X4 Arachis hypogaea HOM05D001418 ORTHO05D003753 6.0e-11 71.6 160 39.4
Gorai.007G066200 Gossypium raimondii HOM05D001418 ORTHO05D003753 6.0e-11 71.6 94 43.6
Phvul.009G155100 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 6.0e-11 71.6 157 34.4
Gohir.A11G057300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 2.3e-10 69.7 94 42.6
AUR62029588 Chenopodium quinoa HOM05D001418 ORTHO05D003753 5.6e-09 65.1 160 33.8
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.2e-08 63.9 186 31.2
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 6.2e-08 61.6 115 35.7
Os11g0195700 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 1.1e-07 60.8 83 41.0
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 1.4e-07 60.5 163 32.5
Ah.06g190930 Amaranthus hybridus HOM05D001418 ORTHO05D003753 2.3e-07 59.7 75 42.7
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 3.1e-07 59.3 190 30.0
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 8.9e-07 57.8 63 47.6
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 1.5e-06 57.0 72 43.1
VMungo1309G0848 Vigna mungo HOM05D001418 ORTHO05D003753 1.5e-06 57.0 156 30.8
RcHm_v2.0_Chr2g0122171 Rosa chinensis HOM05D001418 ORTHO05D003753 3.4e-06 55.8 53 50.9
Zm00001eb202060 Zea mays HOM05D001418 ORTHO05D003753 3.4e-06 55.8 63 46.0
Potri.007G103000 Populus trichocarpa HOM05D001418 ORTHO05D003753 7.6e-06 54.7 157 31.8


User provided reference genes

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