Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.6e-211 738.4 361 100.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 6.8e-204 713.8 361 96.4
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.4e-203 711.4 360 96.1
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.4e-201 706.1 360 95.0
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.6e-192 676.0 360 91.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 4.3e-182 641.3 361 88.1
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.1e-180 636.7 361 87.3
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.0e-178 630.2 360 85.3
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 5.8e-171 604.4 343 87.5
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 3.8e-170 601.7 343 86.6
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 5.0e-170 601.3 361 81.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.1e-169 600.1 343 86.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 5.7e-166 587.8 343 84.5
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 2.4e-148 529.3 303 83.2
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.7e-130 469.9 357 65.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 3.8e-130 468.8 362 65.2
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.6e-126 456.1 362 63.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.6e-126 456.1 362 63.5
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.7e-125 453.4 362 63.3
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-121 440.3 361 62.0
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.5e-121 440.3 361 62.0
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 3.6e-120 435.6 358 61.5
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-119 433.7 358 61.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.3e-119 433.0 364 61.3
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.9e-119 431.0 358 61.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.2e-118 430.6 364 60.7
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 5.7e-118 428.3 365 61.9
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 7.5e-118 427.9 357 60.8
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 7.5e-118 427.9 363 59.8
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.4e-117 424.9 360 61.1
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.4e-116 423.7 361 60.1
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 5.4e-116 421.8 361 58.2
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 7.0e-116 421.4 368 60.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 7.0e-116 421.4 371 59.8
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 7.0e-116 421.4 371 60.1
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 2.7e-115 419.5 359 59.9
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.7e-114 416.8 363 60.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 5.0e-114 415.2 358 59.5
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 5.0e-114 415.2 360 59.4
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 5.0e-114 415.2 359 59.3
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 6.6e-114 414.8 363 60.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 8.6e-114 414.5 361 60.4
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.9e-113 413.3 364 58.5
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.5e-113 412.9 353 60.9
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 9.5e-113 411.0 363 57.9
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 9.5e-113 411.0 356 61.5
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.8e-112 409.5 359 59.9
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.8e-112 409.5 363 57.9
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 3.6e-112 409.1 363 57.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.0e-111 407.5 364 58.5
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.0e-111 407.5 371 56.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.4e-111 407.1 363 57.6
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.3e-111 406.4 363 59.2
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 8.9e-111 404.4 361 57.9
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 1.5e-110 403.7 359 57.4
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-110 403.3 346 60.7
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 2.6e-110 402.9 360 56.4
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 4.4e-110 402.1 358 57.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 5.8e-110 401.7 363 59.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 5.8e-110 401.7 360 58.9
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 7.5e-110 401.4 360 56.7
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 9.8e-110 401.0 363 57.9
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.2e-109 399.8 361 59.0
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 3.7e-109 399.1 385 55.8
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.1e-108 397.5 362 57.2
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.1e-108 397.5 362 57.2
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 4.1e-108 395.6 365 58.1
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 5.4e-108 395.2 362 58.0
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 9.2e-108 394.4 359 57.4
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 9.2e-108 394.4 359 57.4
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.0e-107 393.3 357 56.0
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.7e-107 392.9 360 56.4
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 7.8e-107 391.3 361 56.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 7.8e-107 391.3 359 56.8
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.3e-106 390.6 357 57.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 3.0e-106 389.4 362 56.1
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 8.6e-106 387.9 362 55.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 8.6e-106 387.9 348 59.8
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.5e-105 387.1 359 56.5
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.5e-105 386.3 358 56.7
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.8e-104 382.9 373 53.9
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 6.2e-104 381.7 381 55.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 6.4e-101 371.7 359 56.3
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.1e-100 370.9 359 52.1
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.2e-100 369.4 358 54.7
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 8.6e-98 361.3 360 53.6
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.8e-95 353.6 366 50.5
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 2.3e-95 353.2 343 53.1
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 3.1e-95 352.8 346 54.6
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 4.4e-94 349.0 360 52.8
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 7.6e-94 348.2 357 51.5
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.3e-93 347.4 346 52.6
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 6.0e-91 338.6 371 52.8
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.8e-87 327.0 343 51.9
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 7.6e-86 321.6 361 49.9
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.9e-85 319.7 366 49.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 3.8e-85 319.3 240 64.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.9e-84 317.0 237 65.0
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 4.0e-79 299.3 255 62.4
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.5e-70 270.8 358 43.6
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.1e-64 250.4 161 71.4
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 4.9e-61 239.2 218 57.3
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.1e-60 238.0 376 37.0
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.2e-59 234.6 242 51.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.6e-59 234.2 323 44.3
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 8.2e-56 221.9 239 51.5
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 9.3e-52 208.4 146 69.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.9e-49 200.7 381 34.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.1e-47 193.0 214 50.5
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-46 190.7 118 76.3
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 5.9e-46 189.1 140 61.4
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.6e-43 181.0 218 45.9
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-43 179.5 216 47.2
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-42 177.6 217 47.5
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-42 176.4 214 48.1
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 2.0e-30 137.5 164 40.9
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-23 115.2 64 81.2
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 9.1e-23 112.1 217 36.9
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-21 108.2 64 75.0
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.2e-21 107.5 210 37.1
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-17 94.4 64 68.8
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.1e-11 74.3 50 64.0
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 4.7e-11 73.2 158 29.1
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.4e-10 71.6 70 50.0
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.8e-10 71.2 51 64.7
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.8e-10 71.2 51 64.7
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.8e-10 71.2 51 64.7
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 1.8e-10 71.2 54 61.1
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 3.5e-06 57.0 48 56.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 3.5e-06 57.0 48 56.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 3.5e-06 57.0 48 56.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 3.5e-06 57.0 48 56.2
BraA01t00681Z Brassica rapa HOM05D006038 ORTHO05D007547 7.8e-06 55.8 40 75.0


User provided reference genes

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