Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 4.6e-298 1027.7 778 100.0
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 3.4e-269 931.8 772 91.1
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.8e-202 709.5 777 78.1
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 6.2e-186 655.2 777 73.6
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 3.1e-185 652.9 777 72.3
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.3e-175 620.9 756 75.4
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.8e-156 557.4 773 68.2
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 5.3e-145 519.2 775 68.4
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 9.1e-145 518.5 777 67.2
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 9.1e-145 518.5 777 67.2
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 2.0e-144 517.3 775 67.2
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 3.0e-124 450.3 772 61.1
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 8.9e-108 395.6 449 66.1
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 9.8e-107 392.1 418 69.6
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 4.9e-106 389.8 782 56.3
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.9e-105 387.9 782 52.9
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.4e-105 387.5 782 56.4
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.0e-105 386.0 774 54.9
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 9.2e-105 385.6 770 51.0
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.3e-103 380.9 759 51.5
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 8.6e-103 379.0 772 57.8
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.1e-101 374.4 769 55.8
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 8.1e-101 372.5 778 54.1
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 8.3e-98 362.5 759 51.6
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 5.4e-97 359.8 776 46.6
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.2e-96 358.6 767 56.2
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.2e-88 332.0 726 56.2
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 1.5e-86 325.1 780 51.3
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 9.6e-86 322.4 767 55.1
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 9.3e-81 305.8 777 49.0
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 3.5e-80 303.9 779 51.7
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 4.3e-78 297.0 749 54.5
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 2.8e-77 294.3 483 52.0
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 4.8e-77 293.5 745 52.2
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 6.2e-77 293.1 777 49.9
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.1e-76 292.4 760 50.1
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 3.1e-76 290.8 769 48.4
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 3.1e-76 290.8 773 48.1
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.6e-75 287.7 755 41.6
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 7.6e-75 286.2 763 54.8
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 2.2e-74 284.6 754 52.8
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 4.6e-72 276.9 774 44.8
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 6.7e-71 273.1 778 43.8
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 1.5e-70 271.9 684 54.8
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 2.1e-69 268.1 724 44.3
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 6.2e-69 266.5 724 43.8
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 5.3e-68 263.5 779 50.6
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 5.3e-68 263.5 775 49.2
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 5.8e-67 260.0 725 46.9
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 4.9e-66 256.9 753 45.0
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 6.4e-66 256.5 773 48.8
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.1e-65 255.8 776 46.6
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.4e-65 255.4 516 43.6
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 5.5e-65 253.4 740 47.6
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.7e-64 251.1 729 43.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 3.5e-64 250.8 733 47.7
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 4.6e-64 250.4 767 50.7
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 9.6e-62 242.7 784 48.5
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 2.1e-61 241.5 740 46.5
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.7e-61 240.7 743 45.8
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.8e-60 238.4 724 53.0
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.5e-59 235.3 776 45.6
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.9e-57 228.4 767 50.5
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.2e-57 227.6 724 53.3
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 5.5e-57 226.9 743 43.9
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 4.6e-56 223.8 780 47.1
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 3.0e-55 221.1 768 43.6
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 3.9e-55 220.7 769 47.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 3.9e-55 220.7 756 46.8
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.8e-53 213.8 778 46.5
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 2.4e-52 211.5 778 47.0
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 4.1e-52 210.7 203 63.1
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.0e-51 208.4 526 42.0
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.5e-51 207.2 481 43.7
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 9.4e-49 199.5 785 46.1
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 4.8e-45 187.2 749 45.3
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 4.8e-45 187.2 780 45.8
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 8.2e-45 186.4 773 39.2
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.8e-44 185.3 770 43.4
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 5.3e-44 183.7 351 65.5
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 5.3e-44 183.7 529 39.5
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.6e-43 181.4 779 44.5
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 3.4e-43 181.0 479 40.9
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.0e-42 179.5 727 46.5
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.1e-41 176.0 782 39.0
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.1e-38 166.0 730 38.4
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 2.6e-38 164.9 768 40.9
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 4.4e-38 164.1 724 48.3
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 2.0e-35 155.2 774 42.4
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 5.9e-35 153.7 774 41.3
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 5.9e-35 153.7 526 37.5
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.4e-31 142.5 786 41.9
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.4e-31 142.5 742 40.4
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.9e-31 141.0 771 40.9
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 2.0e-30 138.7 773 39.8
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 7.4e-30 136.7 741 41.7
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.8e-28 132.1 785 38.0
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.0e-23 114.8 341 42.5
C02p24120 Brassica napus HOM05D006421 ORTHO05D039759 1.3e-21 109.4 112 58.9
BcaC03g14920 Brassica carinata HOM05D006421 ORTHO05D039759 1.7e-21 109.0 112 58.9
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.8e-20 105.5 196 38.3
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.7e-19 101.7 344 37.5
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.0e-18 97.4 305 29.5
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 8.5e-18 96.7 727 39.8
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.5e-17 95.9 149 43.0
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-17 95.5 264 46.2
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 3.2e-17 94.7 119 49.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 3.2e-17 94.7 731 40.1
CARHR115700 Cardamine hirsuta HOM05D006421 ORTHO05D008268 7.2e-17 93.6 56 87.5
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.4e-15 89.4 361 31.0
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 6.8e-15 87.0 129 51.2
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 1.2e-14 86.3 129 51.2
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 1.2e-14 86.3 468 29.3
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 4.5e-11 74.3 409 34.2
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 3.3e-09 68.2 108 37.0
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.2e-09 67.0 131 39.7
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 9.5e-09 66.6 112 42.0
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 3.0e-07 61.6 177 27.1
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 4.0e-07 61.2 396 50.5
A07p36910 Brassica napus HOM05D000793 ORTHO05D024548 2.6e-06 58.5 48 68.8
BcaC05g26857 Brassica carinata HOM05D002095 ORTHO05D002058 5.7e-06 57.4 70 45.7


User provided reference genes

Program Settings