Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 7.7e-280 966.5 476 100.0
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 3.5e-272 941.0 478 97.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 6.4e-266 920.2 478 94.6
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.1e-265 919.5 478 94.6
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 9.2e-265 916.4 476 94.5
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 7.8e-264 913.3 476 95.4
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-255 885.6 483 93.0
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.7e-255 885.6 483 93.0
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 1.1e-249 866.3 477 91.2
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 9.2e-249 863.2 477 91.0
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 2.1e-245 852.0 476 89.7
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 6.2e-245 850.5 479 89.1
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 5.8e-243 844.0 477 88.9
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-242 842.4 478 88.7
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.1e-241 839.7 477 89.1
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 1.7e-239 832.4 480 85.0
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 8.4e-226 786.9 486 79.2
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.3e-223 778.9 478 83.9
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 4.3e-222 774.6 483 78.7
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 7.4e-222 773.9 484 81.2
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 9.6e-222 773.5 483 78.1
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.3e-221 773.1 484 78.7
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 1.3e-221 773.1 484 79.1
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.3e-221 773.1 485 79.4
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 2.1e-221 772.3 483 78.3
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 2.8e-221 771.9 485 77.9
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 2.8e-221 771.9 485 79.2
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 3.6e-221 771.5 484 78.7
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.1e-220 770.0 486 78.2
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 2.4e-220 768.8 486 78.0
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 5.3e-220 767.7 485 77.9
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 5.3e-220 767.7 485 77.7
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 9.0e-220 766.9 474 79.1
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.2e-219 766.5 485 79.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.5e-219 766.1 484 78.3
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 4.5e-219 764.6 484 78.3
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 7.6e-219 763.8 485 79.0
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 7.6e-219 763.8 485 79.0
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 7.6e-219 763.8 485 78.6
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 9.9e-219 763.5 484 78.1
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 9.9e-219 763.5 488 77.9
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.3e-218 763.1 484 77.9
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 2.2e-218 762.3 477 78.2
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 3.8e-218 761.5 479 78.1
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 3.8e-218 761.5 484 76.7
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 4.9e-218 761.1 486 79.6
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 8.4e-218 760.4 479 78.3
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 8.4e-218 760.4 483 78.1
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 8.4e-218 760.4 484 77.7
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.4e-217 759.6 483 77.2
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 1.9e-217 759.2 480 78.1
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 2.4e-217 758.8 485 75.9
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.4e-217 758.8 488 76.6
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.2e-217 758.4 486 79.0
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 4.2e-217 758.1 487 78.9
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 5.5e-217 757.7 483 77.8
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 5.5e-217 757.7 486 79.2
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.3e-217 756.9 484 78.1
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 1.2e-216 756.5 477 77.6
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 1.2e-216 756.5 486 78.8
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.1e-216 755.7 484 77.7
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 2.7e-216 755.4 481 77.8
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 2.7e-216 755.4 483 76.8
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 3.5e-216 755.0 480 76.7
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 4.6e-216 754.6 484 76.9
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.0e-216 754.2 484 77.7
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 6.0e-216 754.2 484 77.5
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 7.9e-216 753.8 490 77.3
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 7.9e-216 753.8 482 77.0
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 7.9e-216 753.8 480 77.9
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.3e-215 753.1 485 77.5
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.3e-215 753.1 484 77.5
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-215 752.7 487 76.6
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 2.3e-215 752.3 480 77.7
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 3.9e-215 751.5 490 77.1
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 3.9e-215 751.5 484 77.7
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 8.7e-215 750.4 486 78.4
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.1e-214 750.0 430 84.7
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.5e-214 749.6 486 76.7
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.5e-214 749.6 483 76.4
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.9e-214 749.2 480 76.7
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 2.5e-214 748.8 480 77.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 5.6e-214 747.7 481 76.5
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 1.3e-213 746.5 490 76.1
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.8e-213 745.3 488 76.4
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.7e-213 745.0 482 77.2
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 8.1e-213 743.8 483 76.8
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 3.1e-212 741.9 479 76.2
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 9.0e-212 740.3 484 75.0
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-211 740.0 482 77.0
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 1.5e-211 739.6 485 76.9
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 2.0e-211 739.2 516 72.9
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.3e-210 736.5 478 76.2
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.9e-210 735.3 484 76.0
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 4.9e-210 734.6 490 75.7
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 4.2e-209 731.5 480 75.6
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 1.6e-208 729.6 411 83.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 2.7e-208 728.8 479 75.2
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 4.2e-201 704.9 469 75.1
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 4.8e-197 691.4 503 69.8
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.7e-194 682.9 396 83.3
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.9e-193 679.5 440 72.5
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 7.2e-193 677.6 445 73.7
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 4.6e-192 674.9 417 76.0
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 9.1e-188 660.6 422 73.7
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 4.5e-187 658.3 389 78.7
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 8.8e-175 617.5 392 73.2
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 4.8e-173 611.7 384 77.9
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.4e-167 593.6 433 70.4
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 5.4e-164 581.6 478 65.1
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 9.1e-164 580.9 378 69.8
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 3.5e-163 578.9 393 67.2
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 4.7e-152 542.0 289 90.0
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 8.9e-151 537.7 289 88.9
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 5.4e-140 501.9 338 72.8
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.0e-138 497.7 344 70.6
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.6e-105 384.8 237 78.5
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.1e-103 381.3 224 80.8
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 6.9e-79 298.9 171 81.3
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.0e-62 244.2 196 63.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 8.5e-61 238.8 130 86.9
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.3e-56 222.6 135 80.0
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 3.1e-55 220.3 136 76.5
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.8e-47 194.5 140 72.9
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 4.4e-33 146.7 94 76.6
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 1.2e-30 138.7 105 64.8
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 6.0e-30 136.3 161 49.1
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 5.4e-15 86.7 59 72.9
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 2.6e-09 67.8 152 28.9
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 6.4e-08 63.2 152 30.9
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.1e-07 62.4 158 27.8
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 2.4e-07 61.2 155 29.7
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 7.1e-07 59.7 154 26.6
Nn2g15146 Nelumbo nucifera HOM05D000776 ORTHO05D001624 1.6e-06 58.5 152 28.9
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 1.6e-06 58.5 151 30.5
CAN.G675.29 Capsicum annuum HOM05D000776 ORTHO05D002281 2.7e-06 57.8 219 26.5
Solyc02g069580.3 Solanum lycopersicum HOM05D000776 ORTHO05D002281 4.6e-06 57.0 219 26.5
Sopen02g018710 Solanum pennellii HOM05D000776 ORTHO05D002281 4.6e-06 57.0 219 26.5


User provided reference genes

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