Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 9.7e-176 620.2 341 100.0
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.6e-170 602.8 341 93.5
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 4.7e-162 574.7 341 93.8
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 2.6e-160 568.9 342 93.9
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 8.9e-145 517.3 342 88.3
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 5.4e-142 508.1 342 82.7
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 6.4e-135 484.6 326 82.2
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 6.2e-130 468.0 303 87.8
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.1e-123 447.2 342 76.3
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 1.2e-120 437.2 346 74.6
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.2e-117 427.2 290 84.8
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.7e-109 399.4 252 92.1
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 2.5e-107 392.9 352 68.5
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 2.6e-104 382.9 344 65.4
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 2.2e-103 379.8 340 64.1
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 4.9e-103 378.6 342 65.5
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.1e-102 377.5 342 65.5
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 5.5e-102 375.2 338 66.3
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.6e-101 373.6 237 78.9
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 2.7e-101 372.9 248 76.2
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 4.6e-101 372.1 347 62.8
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 7.9e-101 371.3 237 78.5
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 1.0e-100 370.9 217 84.8
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 3.0e-100 369.4 345 64.1
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 6.7e-100 368.2 348 64.7
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 6.7e-100 368.2 351 61.5
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 3.3e-99 365.9 215 81.4
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 4.3e-99 365.5 242 73.6
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.3e-98 364.0 214 82.7
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 1.6e-98 363.6 352 60.2
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 2.1e-98 363.2 338 63.0
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 2.8e-98 362.8 254 71.7
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 3.7e-98 362.5 232 77.6
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 6.2e-98 361.7 348 64.7
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 8.1e-98 361.3 241 73.9
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 8.1e-98 361.3 235 74.9
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 8.1e-98 361.3 341 59.5
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 8.1e-98 361.3 336 59.5
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 5.3e-97 358.6 243 70.0
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 6.9e-97 358.2 235 74.5
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 5.8e-96 355.1 240 73.3
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 7.6e-96 354.8 226 75.7
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 1.0e-95 354.4 211 77.7
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 4.9e-95 352.1 221 75.6
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.1e-94 350.9 253 78.3
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.4e-94 350.5 219 77.6
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 2.7e-93 346.3 212 78.3
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 7.9e-93 344.7 215 75.8
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.0e-92 344.4 214 80.4
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 1.3e-92 344.0 215 74.4
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 1.3e-92 344.0 214 77.1
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.8e-92 343.6 203 81.3
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 1.8e-92 343.6 237 72.2
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 6.7e-92 341.7 235 69.4
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 1.1e-91 340.9 197 84.8
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.5e-91 339.7 233 73.0
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 2.8e-90 336.3 245 68.2
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 2.4e-89 333.2 224 72.3
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 2.6e-88 329.7 373 53.6
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.7e-87 327.0 213 76.5
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 2.9e-87 326.2 209 71.8
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 5.0e-87 325.5 212 74.5
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.4e-86 323.9 351 56.4
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.4e-86 323.9 233 67.4
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.9e-86 323.6 213 71.8
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 2.7e-85 319.7 298 62.4
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 4.6e-85 318.9 421 50.1
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 6.1e-85 318.5 247 66.4
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 6.1e-85 318.5 306 62.4
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 7.9e-85 318.2 210 71.0
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.0e-84 317.8 346 55.2
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 2.5e-83 313.2 196 72.4
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 2.5e-83 313.2 195 78.5
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 4.3e-83 312.4 218 68.8
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 9.7e-83 311.2 252 61.5
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 1.6e-82 310.5 369 51.5
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 2.2e-82 310.1 331 54.1
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 3.7e-82 309.3 185 77.3
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 6.3e-82 308.5 213 73.2
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 8.2e-82 308.1 195 77.4
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 1.8e-81 307.0 216 70.4
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 1.8e-81 307.0 174 83.3
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 5.9e-80 302.0 212 68.4
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.3e-79 300.8 332 50.9
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.7e-79 300.4 224 63.8
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.4e-78 297.4 215 69.8
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 7.2e-78 295.0 215 68.8
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 9.4e-78 294.7 339 52.5
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.4e-76 290.8 226 64.6
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 5.1e-76 288.9 202 66.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 8.8e-76 288.1 213 67.1
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 1.5e-75 287.3 208 64.9
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 1.8e-73 280.4 239 56.5
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 9.4e-70 268.1 211 60.7
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 7.4e-67 258.5 267 54.3
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 7.4e-67 258.5 267 54.3
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.4e-65 254.2 347 52.2
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 1.2e-64 251.1 207 59.9
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 1.7e-63 247.3 192 66.7
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 2.0e-56 223.8 212 52.4
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 2.7e-56 223.4 168 63.7
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 4.5e-56 222.6 167 61.7
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 1.0e-52 211.5 218 50.9
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 2.2e-50 203.8 247 49.4
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.8e-50 203.4 127 76.4
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 1.1e-49 201.4 217 49.3
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.1e-49 201.4 302 45.0
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 1.9e-46 190.7 206 50.5
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 3.0e-44 183.3 126 69.8
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 8.8e-44 181.8 215 49.3
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 5.4e-41 172.6 89 92.1
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 5.0e-39 166.0 95 84.2
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 5.9e-32 142.5 90 74.4
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 6.4e-26 122.5 233 34.8
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 4.1e-25 119.8 68 85.3
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 7.0e-25 119.0 64 98.4
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 2.3e-20 104.0 154 40.9
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 2.2e-18 97.4 164 31.1
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 7.1e-17 92.4 175 33.7
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 2.3e-12 77.4 48 79.2
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.0e-12 76.6 48 81.2
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.6e-11 73.9 67 53.7
ATR0138G010 Amborella trichopoda HOM05D006516 ORTHO05D008083 6.6e-07 59.3 36 83.3


User provided reference genes

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