Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.5e-87 326.2 173 100.0
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 4.9e-83 311.2 173 96.5
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 2.7e-81 305.4 173 94.2
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 7.8e-81 303.9 173 93.1
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.7e-80 302.8 173 93.1
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 3.0e-80 302.0 173 93.1
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 6.6e-80 300.8 173 92.5
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 1.9e-79 299.3 173 92.5
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.6e-78 296.2 173 91.9
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 4.0e-77 291.6 173 90.2
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 3.5e-73 278.5 173 86.1
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 2.8e-70 268.9 173 82.1
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 2.4e-66 255.8 150 90.7
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 5.1e-64 248.1 173 76.3
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 5.6e-63 244.6 173 74.0
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 1.6e-62 243.0 173 74.6
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 2.1e-62 242.7 173 75.1
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 3.7e-62 241.9 172 76.2
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 8.1e-62 240.7 173 74.6
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 8.1e-62 240.7 173 74.6
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.4e-61 240.0 173 74.6
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.4e-61 240.0 174 74.1
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 74.0
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 74.0
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 73.4
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 3.1e-61 238.8 175 74.9
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 9.0e-61 237.3 175 74.9
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 9.0e-61 237.3 175 74.9
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 9.0e-61 237.3 173 72.3
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.5e-60 236.5 173 71.7
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 2.0e-60 236.1 173 73.4
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 2.0e-60 236.1 175 74.3
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 2.6e-60 235.7 173 73.4
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 2.6e-60 235.7 173 74.0
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.4e-60 235.3 173 73.4
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 5.8e-60 234.6 173 74.0
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 7.6e-60 234.2 173 72.3
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.0e-59 233.8 173 71.7
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.0e-59 233.8 181 71.8
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.3e-59 233.4 165 74.5
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 3.8e-59 231.9 173 69.9
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.8e-59 231.9 173 71.1
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 6.5e-59 231.1 173 71.7
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 6.5e-59 231.1 165 73.3
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 6.5e-59 231.1 173 71.1
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.1e-58 230.3 173 69.9
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.4e-58 229.9 173 69.4
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.9e-58 229.6 173 71.1
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.2e-58 228.8 173 71.1
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 3.2e-58 228.8 164 73.2
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 5.5e-58 228.0 173 71.1
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 5.5e-58 228.0 173 69.4
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 71.1
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 9.3e-58 227.3 165 73.3
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.7e-57 225.7 165 74.5
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.7e-57 225.7 165 74.5
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 2.7e-57 225.7 173 69.9
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 2.7e-57 225.7 163 73.0
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 3.5e-57 225.3 173 68.2
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 3.5e-57 225.3 173 68.8
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 7.9e-57 224.2 173 71.7
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 2.3e-56 222.6 173 70.5
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 6.7e-56 221.1 160 75.6
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 8.7e-56 220.7 173 69.4
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.5e-55 219.2 165 69.1
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 4.3e-55 218.4 173 68.8
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 9.6e-55 217.2 173 67.1
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-54 216.9 194 62.4
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 1.3e-54 216.9 173 68.2
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.6e-54 216.5 173 68.2
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 2.8e-54 215.7 182 65.9
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 4.8e-54 214.9 173 66.5
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.1e-53 213.8 173 68.2
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 2.4e-53 212.6 173 67.1
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 3.1e-53 212.2 149 76.5
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 6.9e-53 211.1 150 72.0
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 5.8e-52 208.0 144 75.7
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 6.5e-51 204.5 144 73.6
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.4e-50 203.4 141 78.0
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 9.3e-50 200.7 173 61.8
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 1.0e-48 197.2 144 72.9
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 1.8e-48 196.4 116 89.7
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.8e-48 196.4 173 65.9
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 2.3e-48 196.1 150 72.0
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.1e-47 193.7 165 58.8
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 1.9e-47 193.0 145 70.3
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 3.3e-47 192.2 173 61.3
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 7.4e-47 191.0 149 68.5
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.6e-46 189.9 174 63.2
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 5.3e-45 184.9 175 55.4
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 3.4e-44 182.2 144 67.4
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.4e-44 182.2 144 66.0
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.2e-43 179.5 134 70.9
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 2.2e-43 179.5 168 58.3
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 1.1e-42 177.2 173 60.1
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 2.3e-40 169.5 99 90.9
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.9e-40 168.7 171 53.8
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.2e-38 162.9 173 57.8
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 3.7e-38 162.2 111 74.8
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 4.5e-36 155.2 144 63.2
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.3e-35 153.7 95 87.4
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 5.0e-35 151.8 120 68.3
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 4.7e-33 145.2 121 62.8
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.8e-32 143.3 146 60.3
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 4.4e-31 138.7 123 61.0
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 5.7e-31 138.3 99 73.7
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 5.0e-27 125.2 170 41.2
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 6.1e-25 118.2 89 69.7
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-24 116.7 98 65.3
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-24 116.7 102 64.7
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.1e-23 114.0 120 55.8
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 8.2e-22 107.8 159 39.6
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 5.3e-21 105.1 86 65.1
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 3.5e-20 102.4 95 61.1
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.9e-20 101.7 105 58.1
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.0e-19 100.9 183 37.7
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.0e-19 100.9 163 43.6
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.5e-18 97.1 86 67.4
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 4.0e-16 89.0 71 66.2
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.2e-15 87.4 105 54.3
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 1.8e-13 80.1 85 55.3
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.5e-12 75.9 58 69.0
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 7.7e-12 74.7 47 76.6
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.1e-10 70.9 59 62.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 1.5e-10 70.5 116 42.2
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.9e-10 70.1 57 61.4
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 4.2e-10 68.9 48 72.9
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 2.1e-09 66.6 58 58.6
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 4.7e-09 65.5 63 58.7


User provided reference genes

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