Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 3.3e-116 421.8 220 100.0
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 3.5e-110 401.7 220 94.5
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 6.4e-104 380.9 220 92.3
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 2.4e-103 379.0 220 90.5
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.6e-99 366.3 220 89.1
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 7.6e-97 357.5 220 87.7
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 5.1e-93 344.7 221 85.5
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 6.6e-93 344.4 221 86.0
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.1e-92 343.6 222 85.6
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.3e-92 342.0 219 84.9
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 5.6e-92 341.3 221 84.6
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 7.4e-92 340.9 220 84.1
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.3e-91 340.1 219 84.0
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.3e-91 340.1 219 84.0
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 3.6e-91 338.6 218 84.9
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 6.2e-91 337.8 219 84.0
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 2.4e-90 335.9 221 83.7
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.6e-78 296.6 218 75.7
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.0e-73 279.6 210 73.3
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 3.4e-73 278.9 211 73.5
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 3.4e-73 278.9 211 73.5
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 4.5e-73 278.5 221 72.9
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 5.9e-73 278.1 211 73.5
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 5.9e-73 278.1 219 69.9
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 5.0e-72 275.0 225 69.3
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 3.2e-71 272.3 218 71.1
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 7.2e-71 271.2 221 68.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.0e-69 265.8 180 77.8
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 3.9e-69 265.4 204 71.6
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 8.7e-69 264.2 225 67.1
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.1e-68 263.8 170 82.9
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.2e-67 259.6 231 67.5
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 8.2e-67 257.7 228 66.2
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.8e-66 256.5 214 67.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.4e-66 256.1 219 67.6
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 3.1e-66 255.8 214 67.3
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 5.3e-66 255.0 214 66.8
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 9.0e-66 254.2 208 69.2
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 9.0e-66 254.2 202 67.8
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.4e-65 252.3 230 66.5
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 5.9e-65 251.5 219 63.9
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.7e-64 250.0 231 63.6
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.9e-64 249.2 167 80.2
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 8.5e-64 247.7 190 73.2
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 4.2e-63 245.4 236 63.1
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 7.2e-63 244.6 171 77.2
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 7.2e-63 244.6 196 70.4
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.2e-62 243.8 232 62.9
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-62 243.4 167 77.8
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 3.6e-62 242.3 175 77.1
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 4.6e-62 241.9 196 69.9
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 6.1e-62 241.5 219 64.4
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 1.0e-61 240.7 204 68.6
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 2.3e-61 239.6 199 67.3
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 3.0e-61 239.2 170 79.4
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.0e-61 239.2 197 67.5
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 3.9e-61 238.8 177 76.8
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 5.1e-61 238.4 214 67.8
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.5e-60 236.9 207 66.7
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.0e-60 236.5 211 66.4
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.0e-60 236.5 173 75.7
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 2.6e-60 236.1 173 72.3
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 4.4e-60 235.3 229 60.3
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 7.4e-60 234.6 167 79.0
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 7.4e-60 234.6 174 75.3
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 1.7e-59 233.4 181 72.4
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 2.2e-59 233.0 159 79.2
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 3.7e-59 232.3 173 69.9
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 3.7e-59 232.3 173 75.1
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 6.3e-59 231.5 174 74.7
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 1.1e-58 230.7 172 72.7
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.1e-58 230.7 211 64.5
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 1.4e-58 230.3 174 75.3
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.8e-58 229.9 235 59.1
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.4e-58 229.6 183 69.4
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 3.1e-58 229.2 228 60.5
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 9.1e-58 227.6 173 75.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.0e-57 226.5 177 75.7
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.6e-57 226.1 219 62.1
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 3.4e-57 225.7 192 67.2
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 4.5e-57 225.3 199 65.8
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 5.9e-57 224.9 209 65.6
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 7.7e-57 224.6 219 62.1
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 7.7e-57 224.6 189 67.2
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.7e-56 223.4 254 57.5
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.2e-56 223.0 230 59.6
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 1.1e-55 220.7 181 68.5
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 4.2e-55 218.8 208 62.0
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.6e-54 216.9 199 63.8
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.7e-54 216.1 124 91.9
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 3.0e-53 212.6 233 57.1
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 5.2e-53 211.8 142 79.6
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.5e-52 210.3 174 67.8
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.3e-51 207.2 162 74.7
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.8e-51 206.1 149 78.5
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 1.4e-50 203.8 189 63.5
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-50 203.8 124 86.3
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-50 203.8 124 86.3
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.5e-49 199.1 167 62.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 5.9e-49 198.4 149 73.8
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 1.7e-48 196.8 159 73.6
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.2e-48 196.4 121 81.8
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 8.5e-48 194.5 175 65.1
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 5.2e-45 185.3 148 63.5
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 2.0e-44 183.3 264 48.1
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 7.5e-44 181.4 167 59.9
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 8.2e-43 177.9 133 66.2
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 5.0e-40 168.7 148 64.2
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 5.5e-39 165.2 197 48.7
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 6.5e-32 141.7 174 46.0
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.5e-31 139.8 108 69.4
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 2.8e-30 136.3 167 52.7
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.7e-27 127.1 98 69.4
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.1e-26 124.4 98 64.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.4e-26 124.0 119 58.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.4e-26 124.0 172 44.8
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.3e-23 112.5 90 67.8
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 7.3e-23 111.7 71 85.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 6.1e-22 108.6 147 40.8
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.4e-20 102.8 74 77.0
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.3e-16 90.1 147 42.2


User provided reference genes

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