Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G16370 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 4.6e-138 494.6 255 100.0
Carub.0007s0546 Capsella rubella HOM05D004157 ORTHO05D004860 2.1e-130 469.2 255 93.3
Sp7g32610 Schrenkiella parvula HOM05D004157 ORTHO05D004860 7.4e-128 460.7 255 90.6
BcaC01g00866 Brassica carinata HOM05D004157 ORTHO05D004860 1.8e-126 456.1 255 91.0
BolC3t20826H Brassica oleracea HOM05D004157 ORTHO05D004860 6.9e-126 454.1 255 90.6
C03p85360 Brassica napus HOM05D004157 ORTHO05D004860 2.6e-125 452.2 255 90.2
BcaB03g11807 Brassica carinata HOM05D004157 ORTHO05D004860 1.3e-124 449.9 255 89.4
A08p16520 Brassica napus HOM05D004157 ORTHO05D004860 1.3e-124 449.9 255 89.8
CARHR243130 Cardamine hirsuta HOM05D004157 ORTHO05D004860 5.5e-123 444.5 251 89.2
Thhalv10026821m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 9.3e-123 443.7 254 88.6
Aa31LG2G15700 Aethionema arabicum HOM05D004157 ORTHO05D004860 6.1e-114 414.5 255 80.8
AT4G34840 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 4.7e-106 388.3 205 96.1
THA.LOC104819635 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 1.8e-102 376.3 255 73.3
PGR042G1356 Punica granatum HOM05D004157 ORTHO05D004860 1.5e-101 373.2 254 72.8
Hma1.2p1_1385F.1_g279670 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 8.5e-100 367.5 254 70.1
QL11p047455 Quercus lobata HOM05D004157 ORTHO05D004860 5.5e-99 364.8 253 68.8
PGR142G1140 Punica granatum HOM05D004157 ORTHO05D004860 1.2e-98 363.6 254 67.3
GSVIVG01024109001 Vitis vinifera HOM05D004157 ORTHO05D004860 2.1e-98 362.8 254 68.5
Potri.004G167200 Populus trichocarpa HOM05D004157 ORTHO05D004860 3.6e-98 362.1 255 69.4
vmacro22690 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 5.2e-97 358.2 254 67.3
Gorai.005G251900 Gossypium raimondii HOM05D004157 ORTHO05D004860 6.7e-97 357.8 255 67.5
CANSAT25G0852 Cannabis sativa HOM05D004157 ORTHO05D004860 1.1e-96 357.1 254 68.5
Eucgr.G01748 Eucalyptus grandis HOM05D004157 ORTHO05D004860 1.5e-96 356.7 254 67.7
PSO675G3214 Papaver somniferum HOM05D004157 ORTHO05D004860 1.5e-96 356.7 254 69.3
Sabra09G0098500 Salix brachista HOM05D004157 ORTHO05D004860 1.5e-96 356.7 255 69.0
Gohir.A03G202800 Gossypium hirsutum HOM05D004157 ORTHO05D004860 2.0e-96 356.3 255 67.5
MD10G1116600 Malus domestica HOM05D004157 ORTHO05D004860 2.0e-96 356.3 255 68.2
Actinidia32087 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.6e-96 355.9 247 70.0
Solyc01g111060.4 Solanum lycopersicum HOM05D004157 ORTHO05D004860 4.4e-96 355.1 251 69.3
TAR381G0601 Trochodendron aralioides HOM05D004157 ORTHO05D004860 4.4e-96 355.1 249 67.9
Sopen01g053120 Solanum pennellii HOM05D004157 ORTHO05D004860 5.7e-96 354.8 251 68.9
Peaxi162Scf00362g01054 Petunia axillaris HOM05D004157 ORTHO05D004860 7.4e-96 354.4 248 71.4
THA.LOC104807783 Tarenaya hassleriana HOM05D004157 ORTHO05D004860 7.4e-96 354.4 246 69.5
Gohir.D02G224100 Gossypium hirsutum HOM05D004157 ORTHO05D004860 9.7e-96 354.0 255 67.1
Aqoxy5G01458 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 1.3e-95 353.6 254 66.9
Cc02_g16620 Coffea canephora HOM05D004157 ORTHO05D004860 1.3e-95 353.6 254 67.7
Migut.I00211 Erythranthe guttata HOM05D004157 ORTHO05D004860 1.7e-95 353.2 249 68.7
Lsat_1_v5_gn_3_45521 Lactuca sativa HOM05D004157 ORTHO05D004860 1.7e-95 353.2 243 70.8
PGSC0003DMG400001636 Solanum tuberosum HOM05D004157 ORTHO05D004860 1.7e-95 353.2 251 69.7
TWI79G0156 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 1.7e-95 353.2 254 67.7
Prupe.8G159400 Prunus persica HOM05D004157 ORTHO05D004860 2.2e-95 352.8 254 67.7
PSO541G4423 Papaver somniferum HOM05D004157 ORTHO05D004860 3.7e-95 352.1 254 68.1
TWI75G1232 Tripterygium wilfordii HOM05D004157 ORTHO05D004860 6.3e-95 351.3 258 67.1
EL10Ac9g21458 Beta vulgaris HOM05D004157 ORTHO05D004860 1.1e-94 350.5 254 66.9
Thecc.02G068100 Theobroma cacao HOM05D004157 ORTHO05D004860 1.1e-94 350.5 255 67.5
RcHm_v2.0_Chr6g0245651 Rosa chinensis HOM05D004157 ORTHO05D004860 1.4e-94 350.1 254 66.5
Aqoxy2G00577 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 3.1e-94 349.0 252 65.5
Cfa005173 Carpinus fangiana HOM05D004157 ORTHO05D004860 4.1e-94 348.6 248 66.9
Nn5g30153 Nelumbo nucifera HOM05D004157 ORTHO05D004860 7.0e-94 347.8 251 65.7
ECA234G4736 Erigeron canadensis HOM05D004157 ORTHO05D004860 9.1e-94 347.4 247 67.2
Glyma.04G005900 Glycine max HOM05D004157 ORTHO05D004860 9.1e-94 347.4 247 67.2
Sc18g0006720 Simmondsia chinensis HOM05D004157 ORTHO05D004860 9.1e-94 347.4 254 67.3
Glyma.06G005600 Glycine max HOM05D004157 ORTHO05D004860 1.6e-93 346.7 246 66.7
FAN24G0875 Fragaria x ananassa HOM05D004157 ORTHO05D004860 2.0e-93 346.3 254 65.7
FvH4_2g02150 Fragaria vesca HOM05D004157 ORTHO05D004860 2.6e-93 345.9 254 65.7
COL.COLO4_17245 Corchorus olitorius HOM05D004157 ORTHO05D004860 4.5e-93 345.1 291 60.1
Phvul.009G000600 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 5.9e-93 344.7 245 67.8
MSTRG.5432 Avicennia marina HOM05D004157 ORTHO05D004860 7.7e-93 344.4 246 69.1
CsaV3_7G000760 Cucumis sativus L. HOM05D004157 ORTHO05D004860 7.7e-93 344.4 246 68.7
AL7G10670 Arabidopsis lyrata HOM05D004157 ORTHO05D004860 1.7e-92 343.2 245 66.5
Lj1g0011325 Lotus japonicus HOM05D004157 ORTHO05D004860 1.7e-92 343.2 246 67.1
Atru.chr5.3210 Acer truncatum HOM05D004157 ORTHO05D004860 2.9e-92 342.4 250 66.4
MELO3C013382.2 Cucumis melo HOM05D004157 ORTHO05D004860 2.9e-92 342.4 248 67.3
Oeu055643.1 Olea europaea HOM05D004157 ORTHO05D004860 2.9e-92 342.4 234 71.4
FAN20G1131 Fragaria x ananassa HOM05D004157 ORTHO05D004860 3.8e-92 342.0 255 65.1
TPR.G38481 Trifolium pratense HOM05D004157 ORTHO05D004860 3.8e-92 342.0 245 66.1
VMungo1309G1201 Vigna mungo HOM05D004157 ORTHO05D004860 3.8e-92 342.0 247 65.6
SGA_v2.0_scaffold80G25867 Striga asiatica HOM05D004157 ORTHO05D004860 5.0e-92 341.7 274 63.1
Thhalv10025990m.g Eutrema salsugineum HOM05D004157 ORTHO05D004860 6.5e-92 341.3 246 65.9
Medtr3g117700 Medicago truncatula HOM05D004157 ORTHO05D004860 6.5e-92 341.3 252 63.1
Actinidia00586 Actinidia chinensis HOM05D004157 ORTHO05D004860 8.5e-92 340.9 248 68.5
Carub.0007s0065 Capsella rubella HOM05D004157 ORTHO05D004860 8.5e-92 340.9 245 66.5
Lalb_Chr11g0061251 Lupinus albus HOM05D004157 ORTHO05D004860 1.1e-91 340.5 243 65.8
Ca_15317_v3 Cicer arietinum L. HOM05D000600 ORTHO05D004860 1.9e-91 339.7 235 67.7
Eucgr.G01749 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.5e-91 339.3 256 67.6
BcaC01g00256 Brassica carinata HOM05D004157 ORTHO05D004860 3.2e-91 339.0 246 65.9
Psat5g003520 Pisum sativum HOM05D004157 ORTHO05D004860 7.2e-91 337.8 243 65.0
AT4G38800 Arabidopsis thaliana HOM05D004157 ORTHO05D004860 9.4e-91 337.4 245 65.3
BcaB03g12226 Brassica carinata HOM05D004157 ORTHO05D004860 9.4e-91 337.4 256 63.7
HanXRQChr10g0294891 Helianthus annuus HOM05D004157 ORTHO05D004860 1.2e-90 337.0 247 65.2
CiPaw.06G125600 Carya illinoinensis HOM05D000447 ORTHO05D000315 1.6e-90 336.7 240 67.1
Os06g0112200 Oryza sativa ssp. japonica HOM05D004157 ORTHO05D004860 2.1e-90 336.3 243 66.3
HPP92_002547 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.1e-90 336.3 247 66.0
CARHR247930 Cardamine hirsuta HOM05D004157 ORTHO05D004860 4.7e-90 335.1 246 64.6
DCAR_028937 Daucus carota HOM05D004157 ORTHO05D004860 8.0e-90 334.3 246 66.7
PSO675G5417 Papaver somniferum HOM05D004157 ORTHO05D004860 8.0e-90 334.3 254 65.4
CAN.G588.18 Capsicum annuum HOM05D004157 ORTHO05D004860 1.4e-89 333.6 234 70.5
C03p77330 Brassica napus HOM05D004157 ORTHO05D004860 2.3e-89 332.8 255 63.5
Lj5A185T60 Lonicera japonica HOM05D004157 ORTHO05D004860 3.0e-89 332.4 246 66.3
Ah.01g009470 Amaranthus hybridus HOM05D004157 ORTHO05D004860 4.0e-89 332.0 265 63.8
A08p24000 Brassica napus HOM05D004157 ORTHO05D004860 4.0e-89 332.0 255 63.5
arahy.Tifrunner.gnm1.ann1.391TM2 Arachis hypogaea HOM05D004157 ORTHO05D004860 6.8e-89 331.3 251 64.9
arahy.Tifrunner.gnm1.ann1.66CLCN Arachis hypogaea HOM05D004157 ORTHO05D004860 6.8e-89 331.3 251 64.9
BraA08t34357Z Brassica rapa HOM05D004157 ORTHO05D004860 8.8e-89 330.9 268 60.8
Manes.04G078800 Manihot esculenta HOM05D004157 ORTHO05D004860 8.8e-89 330.9 228 70.6
unitig_0.g2353 Utricularia gibba HOM05D004157 ORTHO05D004860 8.8e-89 330.9 246 64.2
BraA08t33620Z Brassica rapa HOM05D004157 ORTHO05D004860 1.2e-88 330.5 189 87.8
vmacro02241 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 1.2e-88 330.5 261 61.7
Nitab4.5_0000283g0220 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.5e-88 330.1 243 68.7
BolC3t19986H Brassica oleracea HOM05D004157 ORTHO05D004860 2.0e-88 329.7 260 62.3
PSO541G6022 Papaver somniferum HOM05D004157 ORTHO05D004860 2.0e-88 329.7 254 65.4
vmacro17385 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 2.0e-88 329.7 270 60.4
Aa31LG6G16410 Aethionema arabicum HOM05D004157 ORTHO05D004860 3.4e-88 328.9 280 59.3
Sed0017382 Sechium edule HOM05D004157 ORTHO05D004860 1.3e-87 327.0 234 68.4
Hund00051 Selenicereus undatus HOM05D004157 ORTHO05D004860 4.8e-87 325.1 213 73.7
unitig_21.g20017 Utricularia gibba HOM05D004157 ORTHO05D004860 1.1e-86 323.9 243 64.2
Oeu002957.1 Olea europaea HOM05D004157 ORTHO05D004860 1.8e-86 323.2 243 66.7
Sed0001494 Sechium edule HOM05D000447 ORTHO05D000315 1.8e-86 323.2 242 66.5
ClCG02G004360 Citrullus lanatus HOM05D000447 ORTHO05D000315 4.1e-86 322.0 232 68.5
DCAR_003693 Daucus carota HOM05D004157 ORTHO05D004860 4.1e-86 322.0 213 72.8
VMungo1309G1253 Vigna mungo HOM05D004157 ORTHO05D004860 4.5e-85 318.5 245 62.9
Lj9A389T64 Lonicera japonica HOM05D004157 ORTHO05D004860 5.9e-85 318.2 216 70.4
Zm00001eb036610 Zea mays HOM05D004157 ORTHO05D004860 2.2e-84 316.2 249 63.5
Glyma.06G005700 Glycine max HOM05D004157 ORTHO05D004860 3.8e-84 315.5 247 61.5
AUR62010110 Chenopodium quinoa HOM05D004157 ORTHO05D004860 5.5e-83 311.6 319 53.9
Phvul.009G000700 Phaseolus vulgaris HOM05D004157 ORTHO05D004860 1.2e-82 310.5 267 58.1
Zm00001eb175180 Zea mays HOM05D004157 ORTHO05D004860 1.2e-82 310.5 249 61.8
Duzib052G0280 Durio zibethinus HOM05D004157 ORTHO05D004860 8.0e-82 307.8 255 61.2
ATR0089G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 1.8e-81 306.6 213 69.5
Duzib132G0743 Durio zibethinus HOM05D004157 ORTHO05D004860 1.8e-81 306.6 255 60.8
ATR0095G001 Amborella trichopoda HOM05D004157 ORTHO05D004860 8.8e-81 304.3 213 69.0
Lsat_1_v5_gn_1_62181 Lactuca sativa HOM05D004157 ORTHO05D004860 2.8e-79 299.3 239 59.0
HanXRQChr11g0346651 Helianthus annuus HOM05D004157 ORTHO05D004860 4.1e-78 295.4 250 58.0
Sp7g37020 Schrenkiella parvula HOM05D004157 ORTHO05D004860 5.4e-78 295.0 245 61.2
SHI05673 Sapria himalayana HOM05D004157 ORTHO05D004860 2.7e-77 292.7 212 67.9
PGR042G3985 Punica granatum HOM05D004157 ORTHO05D004860 1.7e-76 290.0 249 57.4
Prupe.8G159500 Prunus persica HOM05D004157 ORTHO05D004860 2.9e-76 289.3 263 58.6
SGA_v2.0_scaffold32G13240 Striga asiatica HOM05D004157 ORTHO05D004860 3.8e-76 288.9 249 57.4
Actinidia27843 Actinidia chinensis HOM05D004157 ORTHO05D004860 2.0e-72 276.6 234 59.4
Eucgr.G01750 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.0e-72 276.6 245 55.9
Ciclev10029225m.g Citrus clementina HOM05D004157 ORTHO05D004860 3.4e-72 275.8 250 56.8
Pp3c14_1450 Physcomitrium patens HOM05D004157 ORTHO05D004860 4.4e-72 275.4 243 57.2
AUR62013103 Chenopodium quinoa HOM05D004157 ORTHO05D004860 1.7e-71 273.5 184 72.3
Pp3c1_20870 Physcomitrium patens HOM05D004157 ORTHO05D004860 2.2e-71 273.1 250 56.0
CDE02G2528 Ceratophyllum demersum HOM05D004157 ORTHO05D004860 3.7e-71 272.3 255 55.3
Rhsim05G0063700 Rhododendron simsii HOM05D004157 ORTHO05D004860 7.0e-70 268.1 196 68.4
Rhsim11G0186900 Rhododendron simsii HOM05D004157 ORTHO05D004860 4.5e-69 265.4 204 62.7
Cpa.g.sc37.201 Carica papaya HOM05D004157 ORTHO05D004860 5.9e-69 265.0 254 55.5
Mapoly0026s0093 Marchantia polymorpha HOM05D004157 ORTHO05D004860 1.0e-68 264.2 242 55.4
Potri.009G128700 Populus trichocarpa HOM05D004157 ORTHO05D004860 4.3e-67 258.8 189 66.7
Pp3c26_5320 Physcomitrium patens HOM05D004157 ORTHO05D004860 5.6e-67 258.5 234 56.0
vmacro22693 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.3e-67 258.1 305 47.2
AagrBONN_evm.TU.Sc2ySwM_368.2286 Anthoceros agrestis HOM05D004157 ORTHO05D004860 4.0e-65 252.3 245 51.8
SMO147G0350 Selaginella moellendorffii HOM05D004157 ORTHO05D004860 9.8e-64 247.7 252 48.8
SEGI_37242 Sequoiadendron giganteum HOM05D004157 ORTHO05D004860 7.8e-61 238.0 183 60.1
PGR042G2276 Punica granatum HOM05D004157 ORTHO05D004860 3.1e-57 226.1 253 48.6
MCO15G557 Micromonas commoda HOM05D004157 ORTHO05D004860 1.5e-56 223.8 243 46.9
Nitab4.5_0000980g0360 Nicotiana tabacum HOM05D004157 ORTHO05D004860 1.5e-56 223.8 147 74.8
Dinv04975 Davidia involucrata HOM05D000600 ORTHO05D000432 8.6e-52 208.0 139 71.9
Cre03.g162550 Chlamydomonas reinhardtii HOM05D004157 ORTHO05D004860 1.5e-51 207.2 234 47.0
vmacro02237 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.3e-51 204.9 207 54.6
Rhsim11G0185600 Rhododendron simsii HOM05D004157 ORTHO05D004860 2.9e-47 193.0 187 54.0
Rhsim11G0186700 Rhododendron simsii HOM05D004157 ORTHO05D004860 3.1e-41 172.9 166 53.6
SalBow3G1540 Salvia bowleyana HOM05D004157 ORTHO05D004860 1.4e-38 164.1 122 65.6
Hma1.2p1_0032F.1_g019710 Hydrangea macrophylla HOM05D004157 ORTHO05D004860 2.7e-37 159.8 148 57.4
MBI09_g11914_MAGBIO Magnolia biondii HOM05D004157 ORTHO05D004860 1.5e-35 154.1 105 68.6
Eucgr.L03396 Eucalyptus grandis HOM05D004157 ORTHO05D004860 2.1e-34 150.2 104 68.3
TAR625G0759 Trochodendron aralioides HOM05D004157 ORTHO05D004860 2.0e-32 143.7 96 70.8
PRCOL_00006969 Prasinoderma coloniale HOM05D004157 ORTHO05D004860 1.3e-31 141.0 237 35.9
Haze_02206 Corylus avellana HOM05D000447 ORTHO05D000315 2.1e-26 123.6 84 70.2
C07p63580 Brassica napus HOM05D004157 ORTHO05D004860 1.7e-23 114.0 118 48.3
BolC7t46771H Brassica oleracea HOM05D004157 ORTHO05D004860 1.7e-23 114.0 118 48.3
SalBow3G3146 Salvia bowleyana HOM05D004157 ORTHO05D004860 2.7e-21 106.7 66 75.8
Medtr0173s0020 Medicago truncatula HOM05D004157 ORTHO05D004860 2.3e-20 103.6 82 61.0
Aqoxy6G02338 Aquilegia oxysepala HOM05D004157 ORTHO05D004860 2.8e-18 96.7 85 57.6
TAR625G0858 Trochodendron aralioides HOM05D004157 ORTHO05D004860 3.7e-18 96.3 149 40.3
arahy.Tifrunner.gnm1.ann1.R1P6K1 Arachis hypogaea HOM05D004157 ORTHO05D004860 2.2e-15 87.0 159 36.5
CBR_g20180 Chara braunii HOM05D004157 ORTHO05D004860 3.8e-15 86.3 99 45.5
Glyma.04G006001 Glycine max HOM05D004157 ORTHO05D004860 3.8e-15 86.3 83 50.6
vmacro02118 Vaccinium macrocarpon HOM05D004157 ORTHO05D004860 7.1e-14 82.0 68 55.9
Rhsim01G0041000 Rhododendron simsii HOM05D004157 ORTHO05D004860 1.8e-12 77.4 63 65.1
HPP92_002565 Vanilla planifolia HOM05D004157 ORTHO05D004860 2.9e-07 60.1 122 36.9
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 3.2e-06 56.6 39 69.2


User provided reference genes

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