Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G15310 Arabidopsis lyrata HOM05D008941 ORTHO05D010842 1.0e-27 125.9 62 100.0
Sp7g33560 Schrenkiella parvula HOM05D008941 ORTHO05D010842 5.7e-26 120.2 63 96.8
CARHR244140 Cardamine hirsuta HOM05D008941 ORTHO05D010842 7.5e-26 119.8 62 95.2
AT4G35783 Arabidopsis thaliana HOM05D008941 ORTHO05D010842 1.1e-24 115.9 63 95.2
C01p03270 Brassica napus HOM05D008941 ORTHO05D010842 1.1e-24 115.9 64 90.6
C07p61340 Brassica napus HOM05D008941 ORTHO05D010842 5.4e-24 113.6 62 88.7
BolC7t46560H Brassica oleracea HOM05D008941 ORTHO05D010842 5.4e-24 113.6 62 88.7
A01p02930 Brassica napus HOM05D008941 ORTHO05D010842 1.6e-23 112.1 63 88.9
BraA01t00276Z Brassica rapa HOM05D008941 ORTHO05D010842 1.6e-23 112.1 63 88.9
BcaNung04354 Brassica carinata HOM05D008941 ORTHO05D010842 2.7e-23 111.3 62 87.1
BraA03t15456Z Brassica rapa HOM05D008941 ORTHO05D010842 3.5e-23 110.9 62 87.1
BolC1t00313H Brassica oleracea HOM05D008941 ORTHO05D010842 7.8e-23 109.8 64 89.1
BcaNung04352 Brassica carinata HOM05D008941 ORTHO05D010842 1.0e-22 109.4 63 87.3
BcaNung05046 Brassica carinata HOM05D008941 ORTHO05D010842 1.0e-22 109.4 63 87.3
Carub.0007s0446 Capsella rubella HOM05D008941 ORTHO05D010842 8.0e-20 99.8 63 81.0
Thecc.01G010500 Theobroma cacao HOM05D008941 ORTHO05D010842 6.8e-11 70.1 65 56.9
COL.COLO4_22503 Corchorus olitorius HOM05D008941 ORTHO05D010842 4.4e-10 67.4 68 55.9
THA.LOC109116896 Tarenaya hassleriana HOM05D008941 ORTHO05D010842 1.7e-09 65.5 59 62.7
Sed0000767 Sechium edule HOM05D008941 ORTHO05D010842 3.2e-08 61.2 60 50.0
Nn6g31885 Nelumbo nucifera HOM05D008941 ORTHO05D010842 9.2e-08 59.7 58 53.4
Lj2g0015207 Lotus japonicus HOM05D008941 ORTHO05D010842 1.6e-07 58.9 58 53.4
Medtr5g023120 Medicago truncatula HOM05D008941 ORTHO05D010842 1.6e-07 58.9 61 50.8
FAN23G1674 Fragaria x ananassa HOM05D008941 ORTHO05D010842 2.1e-07 58.5 39 64.1
Prupe.7G175900 Prunus persica HOM05D008941 ORTHO05D010842 2.7e-07 58.2 30 73.3
Mapoly0151s0015 Marchantia polymorpha HOM05D008941 ORTHO05D010842 3.5e-07 57.8 71 47.9
RcHm_v2.0_Chr2g0098221 Rosa chinensis HOM05D008941 ORTHO05D010842 1.0e-06 56.2 59 50.8
Nn1g07145 Nelumbo nucifera HOM05D008941 ORTHO05D010842 1.3e-06 55.8 62 46.8
MD02G1122600 Malus domestica HOM05D008941 ORTHO05D010842 2.3e-06 55.1 30 70.0
Aqoxy6G01918 Aquilegia oxysepala HOM05D008941 ORTHO05D010842 3.0e-06 54.7 62 48.4
Gohir.A05G170700 Gossypium hirsutum HOM05D008941 ORTHO05D010842 3.0e-06 54.7 64 50.0
CSS0009089 Camellia sinensis var. sinensis HOM05D008941 ORTHO05D010842 3.9e-06 54.3 57 52.6
CSS0012780 Camellia sinensis var. sinensis HOM05D008941 ORTHO05D010842 3.9e-06 54.3 57 52.6
MD04G1094700 Malus domestica HOM05D001415 ORTHO05D001075 3.9e-06 54.3 46 52.2
Gohir.D05G173750 Gossypium hirsutum HOM05D008941 ORTHO05D010842 5.1e-06 53.9 30 73.3
Gorai.009G179000 Gossypium raimondii HOM05D008941 ORTHO05D010842 5.1e-06 53.9 30 73.3
Thecc.06G221500 Theobroma cacao HOM05D008941 ORTHO05D010842 6.6e-06 53.5 60 48.3
Glyma.11G220000 Glycine max HOM05D001415 ORTHO05D001075 8.6e-06 53.1 32 62.5
Glyma.18G037400 Glycine max HOM05D001415 ORTHO05D001075 8.6e-06 53.1 32 62.5


User provided reference genes

Program Settings