Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 1.4e-240 836.3 478 100.0
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.1e-224 783.5 478 93.1
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 5.0e-222 774.6 479 93.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.1e-216 756.9 480 90.4
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 8.9e-211 737.3 481 89.2
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.9e-208 729.6 481 85.2
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 6.6e-206 721.1 495 82.8
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.6e-206 721.1 481 85.4
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.6e-206 721.1 481 85.4
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.3e-205 718.8 492 83.1
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.6e-204 716.5 478 86.6
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 5.1e-198 694.9 454 87.0
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 5.6e-189 664.8 482 80.3
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 3.1e-171 605.9 485 70.9
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 6.9e-171 604.7 482 72.6
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 3.8e-169 599.0 485 72.8
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.9e-168 596.7 486 71.8
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 9.3e-168 594.3 486 72.8
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.7e-167 592.8 498 71.5
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 3.5e-167 592.4 485 71.3
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 4.6e-167 592.0 519 67.2
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 7.9e-167 591.3 485 71.1
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.3e-166 590.5 485 70.3
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 1.8e-166 590.1 484 72.5
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 3.0e-166 589.3 487 71.0
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.1e-165 587.4 509 68.0
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.1e-165 587.4 498 70.7
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 5.3e-163 578.6 486 70.2
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 6.9e-163 578.2 486 70.6
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 2.0e-162 576.6 520 67.3
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 4.5e-162 575.5 488 70.5
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 4.5e-162 575.5 498 68.9
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.8e-162 575.1 482 69.7
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 9.9e-162 574.3 482 70.5
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 4.9e-161 572.0 483 71.6
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 8.4e-161 571.2 485 68.7
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.5e-160 569.7 485 70.1
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.5e-160 569.7 483 68.9
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 5.5e-160 568.5 448 73.7
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.6e-159 567.0 485 68.9
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 2.7e-159 566.2 485 70.3
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 3.5e-159 565.8 488 68.6
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.6e-159 565.5 485 68.2
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 6.0e-159 565.1 484 71.3
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 7.9e-159 564.7 451 72.1
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 5.1e-158 562.0 486 70.8
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 6.7e-158 561.6 485 70.7
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 8.7e-158 561.2 484 69.0
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 9.6e-157 557.8 482 69.5
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 1.1e-155 554.3 452 70.1
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.1e-155 552.7 481 69.9
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 4.0e-155 552.4 508 66.9
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 5.3e-155 552.0 486 68.7
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 5.8e-154 548.5 482 70.1
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.2e-153 546.6 512 67.4
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 3.8e-153 545.8 484 68.8
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 6.5e-153 545.0 486 67.7
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 8.4e-153 544.7 450 69.6
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.9e-152 543.5 503 64.8
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.5e-152 543.1 479 66.8
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 2.5e-152 543.1 450 69.1
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.2e-151 540.8 485 67.8
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.3e-150 537.3 455 70.5
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 3.0e-150 536.2 453 70.4
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 8.7e-150 534.6 485 66.4
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 8.7e-150 534.6 453 70.4
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.5e-149 533.9 497 67.4
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 1.5e-149 533.9 451 71.8
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.7e-149 531.2 487 66.9
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.3e-148 530.8 481 69.9
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 2.2e-148 530.0 478 69.0
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.2e-146 524.2 485 68.9
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 5.9e-146 521.9 480 65.4
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 5.5e-144 515.4 493 61.9
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.1e-141 507.7 449 69.9
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 2.2e-140 503.4 451 69.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 2.2e-140 503.4 450 67.8
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 1.9e-136 490.3 376 73.1
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 4.2e-136 489.2 461 62.7
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.7e-135 486.5 509 59.3
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 4.4e-133 479.2 377 72.4
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.2e-132 476.9 487 62.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 1.8e-131 473.8 489 61.8
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.1e-131 473.0 378 71.2
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.9e-130 468.8 389 71.0
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 2.6e-125 453.4 484 57.0
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.7e-124 450.7 378 68.5
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-121 440.7 392 68.9
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 2.0e-117 427.2 521 55.9
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 6.3e-108 395.6 474 54.0
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 1.1e-107 394.8 382 66.8
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 2.8e-103 380.2 487 50.5
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.2e-101 374.8 468 53.4
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 1.3e-100 371.3 343 70.0
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 1.7e-97 360.9 377 62.9
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 2.0e-93 347.4 322 67.7
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 2.2e-92 344.0 452 54.9
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 3.7e-92 343.2 345 66.1
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 8.6e-89 332.0 310 68.4
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 8.6e-89 332.0 344 61.6
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 3.4e-85 320.1 482 49.2
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 8.3e-84 315.5 310 65.5
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 4.1e-83 313.2 272 68.4
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 2.1e-82 310.8 376 60.6
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.9e-76 290.4 465 46.5
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 4.6e-74 283.1 341 59.8
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.1e-62 245.4 342 55.6
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 6.9e-62 242.7 240 62.9
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 1.2e-61 241.9 234 64.5
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 2.9e-60 237.3 234 63.7
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 6.4e-60 236.1 272 57.7
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.7e-58 230.7 313 54.6
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 3.0e-57 227.3 247 55.1
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.9e-56 224.6 149 74.5
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 4.3e-56 223.4 128 84.4
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 6.2e-55 219.5 128 82.8
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 9.0e-54 215.7 459 44.7
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 3.0e-49 200.7 128 78.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.6e-39 168.3 354 41.8
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.0e-36 159.1 84 89.3
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 3.2e-35 154.1 476 32.4
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 9.4e-27 125.9 111 65.8
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 2.7e-26 124.4 165 48.5
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 3.9e-25 120.6 113 66.4
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 7.4e-24 116.3 114 61.4
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 4.1e-22 110.5 66 81.8
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 1.5e-21 108.6 150 46.0
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-20 105.1 72 72.2
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.2e-19 100.5 66 75.8
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.1e-16 92.4 64 76.6
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.2e-13 82.4 384 28.1
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.0e-12 79.3 78 64.1
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 2.2e-12 78.2 76 67.1
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 2.9e-12 77.8 88 52.3
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 6.5e-12 76.6 91 50.5
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.6e-10 72.0 50 68.0
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 3.3e-08 64.3 324 27.5
ECA233G0248 Erigeron canadensis HOM05D000047 ORTHO05D006606 1.8e-06 58.5 133 43.6


User provided reference genes

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