Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 4.5e-219 764.2 365 100.0
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 9.9e-219 763.1 365 99.7
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.3e-214 748.0 358 99.7
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.8e-207 725.7 391 91.0
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.2e-140 502.3 243 97.5
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 9.2e-140 500.7 239 97.9
AL1G50260 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.2e-132 475.7 237 94.5
AL6G41880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.9e-124 449.9 214 98.6
AL9U11430 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.3e-101 374.0 237 77.2
Carub.0001s3686 Capsella rubella HOM05D012762 ORTHO05D011313 6.8e-26 122.5 241 32.0
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 1.5e-25 121.3 270 31.1
AL5G17280 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 4.4e-25 119.8 210 33.8
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 1.3e-24 118.2 249 29.7
Carub.0002s1156 Capsella rubella HOM05D011333 ORTHO05D011313 1.7e-24 117.9 250 29.2
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 1.7e-24 117.9 237 29.1
AL7G50330 Arabidopsis lyrata HOM05D039756 ORTHO05D011313 1.6e-22 111.3 208 31.2
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 3.5e-22 110.2 241 29.0
Carub.0001s3421 Capsella rubella HOM05D012762 ORTHO05D011313 6.0e-22 109.4 242 30.6
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 3.9e-21 106.7 251 27.9
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 5.2e-18 96.3 241 27.8
Carub.0012s0009 Capsella rubella HOM05D011333 ORTHO05D011313 1.5e-17 94.7 237 27.0
Carub.0003s2757 Capsella rubella HOM05D011333 ORTHO05D011313 9.9e-17 92.0 244 27.0
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-15 88.2 214 29.0
Carub.0001s3396 Capsella rubella HOM05D011333 ORTHO05D011313 3.2e-15 87.0 248 25.4
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.5e-14 83.6 235 26.8
AL8G21940 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.0e-14 82.8 235 26.8
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 7.8e-14 82.4 232 26.3
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.0e-13 82.0 235 27.7
Carub.0076s0002 Capsella rubella HOM05D012762 ORTHO05D011313 1.0e-13 82.0 224 27.7
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 3.3e-12 77.0 239 28.0
BcaC04g21059 Brassica carinata HOM05D000353 ORTHO05D000174 3.6e-11 73.6 224 25.9
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-11 73.6 239 27.6
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 4.7e-11 73.2 226 27.0
BcaC03g17782 Brassica carinata HOM05D000353 ORTHO05D000174 8.1e-11 72.4 230 25.2
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-10 71.6 226 27.0
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.8e-10 71.2 248 24.6
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.1e-10 70.5 248 24.6
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.1e-10 70.5 248 24.6
BcaC02g07867 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-10 70.1 224 25.4
BcaC02g07795 Brassica carinata HOM05D000353 ORTHO05D000174 6.8e-10 69.3 251 24.7
BolC9t55696H Brassica oleracea HOM05D000353 ORTHO05D000174 6.8e-10 69.3 251 24.7
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-09 68.6 213 25.8
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-09 68.6 213 25.8
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-09 68.6 213 25.8
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-09 68.6 213 25.8
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.2e-09 68.6 213 25.8
BcaC05g28066 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-09 68.2 226 26.1
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 1.5e-09 68.2 233 25.3
C05p40800 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-09 68.2 226 26.1
BcaB03g16823 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-09 67.8 224 26.3
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.6e-09 67.4 255 24.7
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 3.4e-09 67.0 233 27.0
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-09 66.6 233 26.2
C01p40510 Brassica napus HOM05D000353 ORTHO05D000174 7.6e-09 65.9 229 24.9
BcaC09g49290 Brassica carinata HOM05D000353 ORTHO05D000174 9.9e-09 65.5 225 24.9
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-08 65.1 229 25.8
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-08 64.3 227 23.3
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 2.9e-08 63.9 210 27.6
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 2.9e-08 63.9 234 24.4
C09p45710 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-08 63.2 227 25.1
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 8.4e-08 62.4 234 24.8
C03p46930 Brassica napus HOM05D000353 ORTHO05D000174 8.4e-08 62.4 233 24.5
C05p51080 Brassica napus HOM05D000353 ORTHO05D000174 8.4e-08 62.4 209 24.4
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-07 60.5 205 24.9
AL4G20350 Arabidopsis lyrata HOM05D000493 ORTHO05D001355 4.2e-07 60.1 29 86.2
C08p30740 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-07 60.1 229 23.6
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 4.2e-07 60.1 233 25.8
BcaC05g25257 Brassica carinata HOM05D000353 ORTHO05D000174 5.4e-07 59.7 225 26.7
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 5.4e-07 59.7 234 24.4
BolC7t44984H Brassica oleracea HOM05D000353 ORTHO05D000174 5.4e-07 59.7 230 25.2
AT1G52950 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 7.1e-07 59.3 231 24.2
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 7.1e-07 59.3 233 26.2
C09p29030 Brassica napus HOM05D000353 ORTHO05D000174 7.1e-07 59.3 83 33.7
BolC7t44430H Brassica oleracea HOM05D000353 ORTHO05D000174 7.1e-07 59.3 83 33.7
Sp6g07340 Schrenkiella parvula HOM05D000353 ORTHO05D000174 7.1e-07 59.3 232 24.6
A04p27050 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 58.5 223 24.2
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 1.2e-06 58.5 209 25.8
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 1.6e-06 58.2 205 23.9
BraA08t32474Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-06 57.8 229 24.9
BcaB03g15167 Brassica carinata HOM05D000353 ORTHO05D000174 2.7e-06 57.4 80 35.0
BcaC03g14055 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-06 56.6 83 31.3
BcaNung03554 Brassica carinata HOM05D000353 ORTHO05D000174 4.6e-06 56.6 83 31.3
AL2G19950 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.0e-06 56.2 220 25.9


User provided reference genes

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