Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL73U10010 Arabidopsis lyrata HOM05D002825 ORTHO05D021407 2.9e-42 174.9 91 100.0
AL5G29530 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 1.6e-40 169.1 87 100.0
AL5G44690 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 1.6e-40 169.1 90 96.7
AL5G44780 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 4.2e-33 144.4 90 82.2
AL5G43680 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 1.1e-30 136.3 90 80.0
AT3G60960 Arabidopsis thaliana HOM05D002825 ORTHO05D011549 3.7e-29 131.3 90 78.9
Carub.0201s0002 Capsella rubella HOM05D002825 ORTHO05D011549 7.6e-27 123.6 90 75.6
Carub.0005s2842 Capsella rubella HOM05D002825 ORTHO05D011549 6.5e-26 120.6 90 72.2
Carub.0006s2575 Capsella rubella HOM05D002825 ORTHO05D011549 1.4e-25 119.4 90 72.2
AL5G43820 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 1.5e-22 109.4 90 70.0
BcaB02g07363 Brassica carinata HOM05D002825 ORTHO05D021407 1.9e-22 109.0 91 67.0
BcaC08g45156 Brassica carinata HOM05D002825 ORTHO05D021407 5.9e-19 97.4 91 60.4
C06p27800 Brassica napus HOM05D000647 ORTHO05D011549 5.9e-19 97.4 91 60.4
BolC6t37947H Brassica oleracea HOM05D000647 ORTHO05D011549 5.9e-19 97.4 91 60.4
BcaC04g21473 Brassica carinata HOM05D002825 ORTHO05D021407 1.4e-17 92.8 86 59.3
C09p31380 Brassica napus HOM05D002825 ORTHO05D021407 1.4e-17 92.8 86 59.3
AL3G34220 Arabidopsis lyrata HOM05D002825 ORTHO05D011549 6.5e-10 67.4 79 49.4
Thhalv10023949m.g Eutrema salsugineum HOM05D002825 ORTHO05D003824 1.4e-07 59.7 66 56.1


User provided reference genes

Program Settings