Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G53370 Arabidopsis lyrata HOM05D000325 ORTHO05D000583 6.9e-11 69.3 37 100.0
AL4G23720 Arabidopsis lyrata HOM05D000325 ORTHO05D000583 5.0e-09 63.2 36 91.7
AL7G42670 Arabidopsis lyrata HOM05D000325 ORTHO05D000583 5.0e-09 63.2 36 91.7
AT4G35730 Arabidopsis thaliana HOM05D000325 ORTHO05D000583 2.5e-08 60.8 36 91.7
AL7G15380 Arabidopsis lyrata HOM05D000325 ORTHO05D000583 4.2e-08 60.1 36 88.9
CARHR244060 Cardamine hirsuta HOM05D000325 ORTHO05D000583 9.4e-08 58.9 36 86.1
Carub.0007s0453 Capsella rubella HOM05D000325 ORTHO05D000583 2.1e-07 57.8 36 86.1
Thhalv10025095m.g Eutrema salsugineum HOM05D000325 ORTHO05D000583 2.1e-07 57.8 36 86.1
Aa31LG6G12680 Aethionema arabicum HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
BcaC01g00514 Brassica carinata HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
A01p02970 Brassica napus HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
A08p21750 Brassica napus HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
C01p03320 Brassica napus HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
C03p80840 Brassica napus HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
BolC1t00317H Brassica oleracea HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
BolC3t20338H Brassica oleracea HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
BraA01t00280Z Brassica rapa HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
BraA08t34128Z Brassica rapa HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Cfa007046 Carpinus fangiana HOM05D000199 ORTHO05D000583 4.7e-07 56.6 36 83.3
CiPaw.07G005000 Carya illinoinensis HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
CiPaw.08G180000 Carya illinoinensis HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
DCAR_014047 Daucus carota HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Duzib187G1736 Durio zibethinus HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Gohir.D11G177900 Gossypium hirsutum HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Gorai.007G189800 Gossypium raimondii HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
MD02G1121300 Malus domestica HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
MD15G1235100 Malus domestica HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Sp7g33480 Schrenkiella parvula HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
Thecc.01G009400 Theobroma cacao HOM05D000325 ORTHO05D000583 4.7e-07 56.6 36 83.3
QL06p052493 Quercus lobata HOM05D000325 ORTHO05D000583 6.1e-07 56.2 36 83.3
Dinv08536 Davidia involucrata HOM05D000325 ORTHO05D000583 7.9e-07 55.8 36 80.6
CANSAT25G0295 Cannabis sativa HOM05D000325 ORTHO05D000583 1.0e-06 55.5 36 80.6
Gohir.A11G170900 Gossypium hirsutum HOM05D000325 ORTHO05D000583 1.0e-06 55.5 36 80.6
Lj2A489T53 Lonicera japonica HOM05D000325 ORTHO05D000583 1.0e-06 55.5 36 80.6
PGR119G1953 Punica granatum HOM05D000325 ORTHO05D000583 1.0e-06 55.5 36 80.6
THA.LOC104804285 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 1.0e-06 55.5 36 80.6
Ca_08921_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Ca_22399_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
COL.COLO4_22516 Corchorus olitorius HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Glyma.02G043200 Glycine max HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Glyma.16G120200 Glycine max HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Hma1.2p1_1639F.1_g294970 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Lj4g0024469 Lotus japonicus HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Lalb_Chr05g0229731 Lupinus albus HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Manes.01G153000 Manihot esculenta HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Medtr8g074540 Medicago truncatula HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Phvul.003G268000 Phaseolus vulgaris HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
Prupe.7G178000 Prunus persica HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
TPR.G14971 Trifolium pratense HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
VMungo0251G2355 Vigna mungo HOM05D000325 ORTHO05D000583 1.4e-06 55.1 36 80.6
ClCG01G020720 Citrullus lanatus HOM05D000325 ORTHO05D000583 1.8e-06 54.7 36 80.6
MELO3C007956.2 Cucumis melo HOM05D000325 ORTHO05D000583 1.8e-06 54.7 36 80.6
CsaV3_6G047650 Cucumis sativus L. HOM05D000325 ORTHO05D000583 1.8e-06 54.7 36 80.6
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.8e-06 54.7 36 77.8
Rhsim08G0028800 Rhododendron simsii HOM05D000325 ORTHO05D000583 1.8e-06 54.7 36 80.6
vmacro18447 Vaccinium macrocarpon HOM05D000325 ORTHO05D000583 1.8e-06 54.7 36 80.6
Migut.L00738 Erythranthe guttata HOM05D000325 ORTHO05D000583 2.3e-06 54.3 36 75.0
Eucgr.I02282 Eucalyptus grandis HOM05D000199 ORTHO05D001039 2.3e-06 54.3 36 77.8
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 2.3e-06 54.3 36 75.0
Lsat_1_v5_gn_2_74980 Lactuca sativa HOM05D000325 ORTHO05D000583 3.0e-06 53.9 34 82.4
Psat4g103920 Pisum sativum HOM05D000325 ORTHO05D000583 3.0e-06 53.9 36 77.8
HanXRQChr07g0192581 Helianthus annuus HOM05D000325 ORTHO05D000583 3.9e-06 53.5 34 82.4
arahy.Tifrunner.gnm1.ann1.4BAF6Y Arachis hypogaea HOM05D000325 ORTHO05D000583 5.1e-06 53.1 36 77.8
arahy.Tifrunner.gnm1.ann1.E29QEI Arachis hypogaea HOM05D000325 ORTHO05D000583 5.1e-06 53.1 36 77.8
EL10Ac6g13353 Beta vulgaris HOM05D000325 ORTHO05D000583 5.1e-06 53.1 36 72.2
Nn5g30906 Nelumbo nucifera HOM05D000325 ORTHO05D000583 5.1e-06 53.1 33 81.8
Sed0001918 Sechium edule HOM05D000325 ORTHO05D000583 5.1e-06 53.1 36 77.8
Cpa.g.sc6.332 Carica papaya HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
FvH4_1g10740 Fragaria vesca HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
FAN19G0858 Fragaria x ananassa HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
FAN26G1371 Fragaria x ananassa HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
FAN28G2846 Fragaria x ananassa HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
RcHm_v2.0_Chr2g0097911 Rosa chinensis HOM05D000325 ORTHO05D000583 6.7e-06 52.8 36 77.8
Actinidia28738 Actinidia chinensis HOM05D000325 ORTHO05D000583 8.8e-06 52.4 36 75.0
CSS0008458 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 8.8e-06 52.4 36 77.8
Oeu012557.1 Olea europaea HOM05D000325 ORTHO05D000583 8.8e-06 52.4 36 75.0
Potri.007G059800 Populus trichocarpa HOM05D000325 ORTHO05D000583 8.8e-06 52.4 36 75.0
GSVIVG01004308001 Vitis vinifera HOM05D000325 ORTHO05D000583 8.8e-06 52.4 36 75.0


User provided reference genes

Program Settings