Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 2.4e-147 525.4 253 100.0
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 1.8e-142 509.2 253 96.8
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 1.4e-139 499.6 253 94.5
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 1.8e-134 482.6 253 90.9
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.3e-132 476.5 254 89.4
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 5.4e-131 471.1 253 88.9
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 4.2e-123 444.9 253 84.2
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 1.7e-121 439.5 246 85.8
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 2.3e-121 439.1 245 86.5
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 6.6e-121 437.6 245 87.3
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 8.7e-121 437.2 245 86.1
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 2.5e-120 435.6 243 86.8
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 3.6e-119 431.8 253 79.8
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 6.2e-119 431.0 245 84.9
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 6.9e-110 401.0 253 73.9
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.3e-108 396.7 255 72.9
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 1.3e-108 396.7 253 73.1
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 1.3e-108 396.7 253 73.1
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 2.4e-107 392.5 253 72.3
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 4.2e-107 391.7 253 70.4
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 4.2e-107 391.7 253 73.5
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 7.1e-107 391.0 253 71.9
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 9.3e-107 390.6 253 72.3
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 9.3e-107 390.6 253 72.3
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 4.6e-106 388.3 253 70.8
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 7.9e-106 387.5 252 70.2
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 7.9e-106 387.5 253 71.5
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.0e-105 387.1 253 70.4
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 1.3e-105 386.7 253 71.9
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 2.3e-105 386.0 253 70.0
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 6.7e-105 384.4 255 72.9
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 1.5e-104 383.3 253 70.8
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 1.9e-104 382.9 252 70.6
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 5.6e-104 381.3 253 71.1
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 7.4e-104 380.9 253 69.6
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 1.6e-103 379.8 252 69.4
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 4.8e-103 378.3 253 71.1
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.1e-102 377.1 253 68.0
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.1e-102 375.6 252 69.0
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 3.1e-102 375.6 243 71.6
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 5.3e-102 374.8 252 69.4
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.0e-101 372.9 253 69.2
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 2.0e-101 372.9 256 68.0
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 2.6e-101 372.5 243 72.4
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 3.4e-101 372.1 253 70.0
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 1.7e-100 369.8 253 68.8
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 3.8e-100 368.6 253 68.8
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 8.4e-100 367.5 253 68.4
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 8.4e-100 367.5 254 67.7
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-99 367.1 251 68.1
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 3.2e-99 365.5 252 66.7
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.5e-99 364.8 247 68.8
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 7.1e-99 364.4 253 68.8
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 9.3e-99 364.0 245 69.0
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.6e-98 363.2 253 66.4
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 2.1e-98 362.8 254 65.0
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.5e-98 362.1 252 67.9
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 6.0e-98 361.3 258 64.7
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 7.9e-98 360.9 253 64.8
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 7.9e-98 360.9 253 66.0
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.8e-97 359.8 253 66.4
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 1.8e-97 359.8 244 70.5
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 1.8e-97 359.8 253 65.6
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 3.0e-97 359.0 248 66.9
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 3.0e-97 359.0 253 66.8
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.7e-97 357.8 243 68.7
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 8.7e-97 357.5 257 64.2
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.5e-96 356.7 253 67.2
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 2.5e-96 355.9 246 66.3
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 7.4e-96 354.4 266 64.7
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 1.1e-94 350.5 253 62.5
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 1.4e-94 350.1 243 65.8
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 3.1e-94 349.0 253 64.4
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.2e-93 347.1 252 63.5
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 1.2e-93 347.1 254 65.0
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 2.0e-93 346.3 255 64.3
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 3.4e-93 345.5 254 65.4
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 1.0e-92 344.0 243 64.6
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.0e-92 344.0 269 61.3
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.3e-92 343.6 255 63.9
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 1.7e-92 343.2 253 61.7
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 2.2e-92 342.8 254 64.6
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 2.2e-92 342.8 243 63.8
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 1.1e-91 340.5 253 64.0
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 2.7e-90 335.9 254 63.8
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 2.7e-90 335.9 254 63.8
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.8e-89 333.2 254 63.4
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 8.7e-89 330.9 244 62.3
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 2.5e-88 329.3 286 56.6
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 1.6e-87 326.6 254 61.8
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 2.6e-85 319.3 254 62.6
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 5.9e-85 318.2 291 54.3
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.0e-84 317.4 217 66.8
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 2.6e-80 302.8 244 59.4
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 5.7e-80 301.6 343 45.2
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 1.7e-68 263.5 166 72.3
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 5.0e-68 261.9 263 50.2
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 8.5e-68 261.2 255 52.9
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 4.5e-61 238.8 279 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 2.3e-57 226.5 297 41.4
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.9e-51 206.8 254 45.7
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 2.5e-51 206.5 253 45.5
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 3.1e-46 189.5 288 37.5
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 4.3e-43 179.1 165 53.9
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 9.8e-40 167.9 253 36.8
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 4.7e-34 149.1 243 36.2
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 2.3e-33 146.7 117 58.1
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 3.1e-33 146.4 95 72.6
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 2.9e-31 139.8 119 57.1
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 2.6e-16 90.1 59 66.1
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 4.9e-15 85.9 48 81.2
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.4e-06 57.8 51 52.9


User provided reference genes

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