Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 5.1e-66 254.2 123 100.0
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 9.9e-62 240.0 123 93.5
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.2e-56 223.0 119 89.1
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 1.6e-56 222.6 123 85.4
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 2.1e-56 222.2 122 83.6
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 2.8e-56 221.9 122 83.6
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 4.7e-56 221.1 123 86.2
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 8.1e-56 220.3 121 86.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.1e-55 219.9 122 82.8
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 3.1e-55 218.4 123 82.1
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 3.1e-55 218.4 123 82.1
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 3.1e-55 218.4 123 82.1
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 2.0e-54 215.7 123 84.6
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.3e-53 213.0 123 80.5
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 7.8e-51 203.8 120 80.0
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.9e-44 182.6 120 70.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 2.4e-44 182.2 117 70.1
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 9.3e-44 180.3 117 69.2
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.2e-43 179.9 120 71.7
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 1.2e-43 179.9 117 67.5
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 2.1e-43 179.1 119 69.7
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 2.7e-43 178.7 117 67.5
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 3.5e-43 178.3 119 68.1
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 3.5e-43 178.3 121 68.6
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 7.9e-43 177.2 121 66.9
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.3e-42 175.6 117 66.7
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.0e-42 175.3 117 66.7
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 3.9e-42 174.9 117 68.4
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 5.1e-42 174.5 117 67.5
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 8.7e-42 173.7 118 65.3
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 8.7e-42 173.7 117 67.5
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 8.7e-42 173.7 118 66.9
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 2.5e-41 172.2 120 65.8
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 2.5e-41 172.2 120 65.0
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 3.3e-41 171.8 120 65.0
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 3.3e-41 171.8 119 66.4
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.3e-41 171.8 117 69.2
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 4.3e-41 171.4 120 66.7
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 4.3e-41 171.4 118 64.4
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 5.6e-41 171.0 120 65.8
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 7.4e-41 170.6 120 65.0
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 7.4e-41 170.6 111 72.1
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 9.6e-41 170.2 120 65.0
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 2.8e-40 168.7 117 65.0
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.8e-40 168.7 120 62.5
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 3.7e-40 168.3 121 65.3
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 4.8e-40 167.9 117 65.0
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 6.2e-40 167.5 119 65.5
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 6.2e-40 167.5 116 64.7
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 6.2e-40 167.5 119 64.7
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.8e-39 166.0 123 64.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 2.4e-39 165.6 118 64.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.1e-39 165.2 120 62.5
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 3.1e-39 165.2 120 62.5
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 4.0e-39 164.9 119 61.3
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 4.0e-39 164.9 120 65.0
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 9.0e-39 163.7 118 60.2
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 2.6e-38 162.2 118 61.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.4e-38 161.8 119 61.3
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 3.4e-38 161.8 118 59.3
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 4.5e-38 161.4 119 60.5
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 7.6e-38 160.6 119 62.2
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.3e-37 159.8 118 62.7
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.7e-37 159.5 119 62.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 4.9e-37 157.9 141 53.2
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.9e-37 157.9 119 61.3
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 1.1e-36 156.8 119 59.7
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.1e-36 156.8 120 63.3
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 1.9e-36 156.0 109 64.2
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 7.1e-36 154.1 120 59.2
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.6e-35 152.9 119 58.0
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 2.7e-35 152.1 123 58.5
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.3e-34 149.8 109 62.4
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 8.7e-34 147.1 99 67.7
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 3.3e-33 145.2 116 58.6
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 4.3e-33 144.8 122 59.0
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 4.3e-33 144.8 146 50.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 9.6e-33 143.7 120 55.8
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 2.8e-32 142.1 104 60.6
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-30 136.0 96 63.5
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 2.6e-30 135.6 113 57.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.2e-27 126.7 119 50.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 2.1e-27 125.9 79 73.4
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 2.3e-26 122.5 120 50.0
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.0e-26 122.1 80 68.8
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 9.0e-23 110.5 115 49.6
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.2e-21 105.9 78 64.1
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 3.8e-21 105.1 114 46.5
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 2.5e-20 102.4 76 64.5
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 6.1e-19 97.8 87 56.3
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.9e-18 95.1 79 59.5
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.3e-16 90.1 59 66.1
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 4.8e-16 88.2 104 44.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 9.4e-12 73.9 104 41.3
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.2e-06 57.0 92 41.3
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.2e-06 57.0 41 58.5


User provided reference genes

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