Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 4.0e-105 384.8 197 100.0
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.1e-98 362.5 197 93.9
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 4.9e-95 351.3 197 91.9
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 2.3e-92 342.4 197 89.8
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 3.1e-89 332.0 194 88.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 2.3e-84 315.8 198 84.8
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 1.9e-83 312.8 198 84.3
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 1.9e-83 312.8 198 84.3
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 6.2e-82 307.8 198 83.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 8.1e-82 307.4 198 83.8
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 2.3e-81 305.8 198 82.8
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 2.2e-79 299.3 197 80.7
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 6.4e-79 297.7 190 81.1
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.7e-63 246.5 161 77.6
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 3.2e-62 242.3 188 68.6
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 9.3e-62 240.7 132 92.4
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 2.1e-61 239.6 151 77.5
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 3.5e-61 238.8 177 70.6
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 2.3e-60 236.1 193 68.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 3.9e-60 235.3 188 67.6
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 4.3e-59 231.9 190 65.3
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 5.6e-59 231.5 191 67.0
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 5.6e-59 231.5 195 64.1
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 9.6e-59 230.7 156 75.0
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.6e-58 229.9 188 66.0
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 2.1e-58 229.6 190 65.3
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 2.8e-58 229.2 190 65.3
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 2.8e-58 229.2 167 72.5
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 4.8e-58 228.4 189 66.1
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 4.8e-58 228.4 164 70.1
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 6.2e-58 228.0 151 77.5
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 6.2e-58 228.0 178 67.4
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.0e-57 225.3 193 62.7
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 9.0e-57 224.2 151 75.5
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.2e-56 223.8 199 63.3
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 1.2e-56 223.8 138 81.2
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 2.0e-56 223.0 190 63.2
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 2.6e-56 222.6 151 74.8
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 2.6e-56 222.6 190 63.2
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 2.6e-56 222.6 135 82.2
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 4.5e-56 221.9 198 61.6
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 9.9e-56 220.7 196 62.8
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 1.3e-55 220.3 154 70.1
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.7e-55 219.9 161 72.7
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.2e-55 219.5 169 69.2
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 2.9e-55 219.2 136 80.1
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 4.9e-55 218.4 138 76.1
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 6.4e-55 218.0 162 69.1
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 6.4e-55 218.0 138 75.4
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 1.1e-54 217.2 134 81.3
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 1.9e-54 216.5 146 76.7
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 2.4e-54 216.1 145 73.8
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 3.2e-54 215.7 154 72.1
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 3.2e-54 215.7 145 73.8
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 3.2e-54 215.7 167 65.9
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.2e-54 215.3 138 76.8
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.2e-54 215.3 138 76.8
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 5.4e-54 214.9 152 72.4
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 9.3e-54 214.2 163 69.3
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.2e-53 213.8 163 69.9
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.2e-53 213.8 159 71.7
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.1e-53 213.0 145 73.8
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.7e-53 212.6 152 71.1
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 4.6e-53 211.8 194 61.9
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 6.0e-53 211.5 148 73.0
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 6.0e-53 211.5 143 72.7
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 7.9e-53 211.1 132 79.5
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 1.0e-52 210.7 133 76.7
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 2.3e-52 209.5 145 73.8
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.0e-52 209.1 133 76.7
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 5.6e-51 204.9 190 62.6
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.6e-51 204.9 190 59.5
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 5.6e-51 204.9 193 58.0
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.1e-50 203.0 222 54.5
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 8.1e-50 201.1 164 65.9
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.4e-49 199.5 144 69.4
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 4.0e-49 198.7 146 65.8
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 5.3e-49 198.4 137 72.3
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.2e-48 197.2 181 59.7
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.2e-48 197.2 134 74.6
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 2.0e-48 196.4 162 63.6
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.0e-48 196.4 234 52.1
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 4.5e-48 195.3 190 57.9
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 5.8e-48 194.9 165 61.2
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.9e-46 189.9 151 65.6
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 4.2e-46 188.7 138 70.3
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 5.5e-46 188.3 123 72.4
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.2e-39 166.4 95 86.3
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.2e-39 166.4 181 56.9
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 3.8e-39 165.6 205 49.8
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 3.2e-38 162.5 201 50.7
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 2.1e-37 159.8 83 95.2
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 2.7e-37 159.5 114 68.4
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 7.9e-37 157.9 168 55.4
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 1.8e-36 156.8 110 72.7
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 3.9e-36 155.6 95 80.0
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.5e-35 152.9 99 79.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.3e-34 150.6 95 78.9
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.3e-34 150.6 101 75.2
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 9.0e-33 144.4 99 74.7
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.2e-32 144.1 153 56.9
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.2e-30 135.6 91 70.3
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 7.2e-30 134.8 106 67.0
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 1.0e-28 131.0 171 43.9
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.1e-27 127.5 198 42.9
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.5e-27 127.1 143 48.3
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.5e-24 117.1 94 61.7
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 7.7e-24 114.8 71 83.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 7.7e-24 114.8 71 83.1
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 6.7e-20 101.7 68 70.6
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.0e-19 100.1 75 62.7
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.7e-18 97.1 63 79.4
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.4e-17 93.2 109 40.4
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 2.4e-17 93.2 71 69.0
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 2.6e-11 73.2 39 87.2
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 2.6e-11 73.2 39 87.2


User provided reference genes

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