Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 5.5e-89 330.9 159 100.0
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.6e-88 328.2 158 99.4
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 4.8e-77 291.2 178 84.3
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 9.1e-76 287.0 178 82.0
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 5.0e-74 281.2 178 80.3
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 5.5e-73 277.7 178 79.8
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 5.5e-73 277.7 177 80.2
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 7.2e-73 277.3 178 80.3
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 7.2e-73 277.3 178 79.8
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 1.2e-72 276.6 178 78.7
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 1.2e-72 276.6 178 79.8
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 1.2e-72 276.6 178 79.8
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 3.6e-72 275.0 178 79.2
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 3.6e-72 275.0 178 78.7
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 3.6e-72 275.0 178 79.2
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 4.7e-72 274.6 178 79.8
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 4.7e-72 274.6 178 79.8
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 8.0e-72 273.9 178 78.7
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 6.1e-64 247.7 178 71.9
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 3.5e-59 231.9 181 63.5
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 2.9e-58 228.8 181 64.1
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 6.6e-58 227.6 181 63.0
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 4.2e-57 224.9 181 63.0
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 4.2e-57 224.9 178 64.0
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 7.2e-57 224.2 181 63.5
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 1.2e-56 223.4 177 62.7
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 1.6e-56 223.0 181 61.3
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 2.1e-56 222.6 180 62.2
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 8.0e-56 220.7 178 62.4
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 2.3e-55 219.2 183 60.7
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 4.0e-55 218.4 181 61.9
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 5.2e-55 218.0 181 61.3
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 6.8e-55 217.6 178 61.8
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 6.8e-55 217.6 181 60.2
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 1.2e-54 216.9 180 61.1
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.2e-54 216.9 181 60.8
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 1.2e-54 216.9 177 62.7
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 1.2e-54 216.9 181 60.8
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 2.0e-54 216.1 180 61.7
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.0e-54 216.1 181 60.8
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 2.0e-54 216.1 181 60.2
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 2.0e-54 216.1 181 63.5
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.6e-54 215.7 181 60.8
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.6e-54 215.7 181 60.8
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 2.6e-54 215.7 181 60.8
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.6e-54 215.7 181 60.8
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 2.6e-54 215.7 181 62.4
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 5.7e-54 214.5 182 62.1
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 5.7e-54 214.5 181 59.1
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 7.5e-54 214.2 180 59.4
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 9.8e-54 213.8 181 60.2
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 9.8e-54 213.8 181 59.7
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 9.8e-54 213.8 181 61.9
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 9.8e-54 213.8 181 59.1
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 1.3e-53 213.4 181 59.7
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.3e-53 213.4 181 59.1
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 1.3e-53 213.4 181 59.1
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 1.3e-53 213.4 181 59.1
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 1.3e-53 213.4 181 62.4
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.2e-53 212.6 181 59.1
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 2.2e-53 212.6 181 60.2
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 2.2e-53 212.6 180 60.6
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 2.2e-53 212.6 181 59.7
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 2.9e-53 212.2 181 58.0
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.7e-53 211.8 181 58.0
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 3.7e-53 211.8 174 63.2
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 6.3e-53 211.1 181 56.4
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 6.3e-53 211.1 181 60.8
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 6.3e-53 211.1 187 59.4
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 6.3e-53 211.1 180 60.0
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 8.3e-53 210.7 181 58.6
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 8.3e-53 210.7 181 60.2
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 8.3e-53 210.7 181 61.9
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 1.1e-52 210.3 181 60.2
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 1.4e-52 209.9 181 61.9
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 1.4e-52 209.9 181 59.1
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 1.4e-52 209.9 185 58.9
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 1.4e-52 209.9 181 61.9
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 1.8e-52 209.5 180 60.0
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 2.4e-52 209.1 181 60.2
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 4.1e-52 208.4 181 60.8
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 4.1e-52 208.4 178 61.2
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 9.2e-52 207.2 189 55.6
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.2e-51 206.8 181 59.1
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 1.2e-51 206.8 181 58.0
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 1.6e-51 206.5 181 58.6
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 2.7e-51 205.7 178 55.6
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 2.7e-51 205.7 183 58.5
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 3.5e-51 205.3 181 56.9
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 7.8e-51 204.1 189 54.5
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 1.0e-50 203.8 181 57.5
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 2.9e-50 202.2 183 58.5
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 2.9e-50 202.2 180 56.1
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 3.9e-50 201.8 180 60.6
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 8.6e-50 200.7 172 59.9
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 2.5e-49 199.1 173 60.1
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 3.3e-49 198.7 181 58.0
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 8.0e-48 194.1 181 56.4
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 8.0e-48 194.1 180 55.6
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 1.0e-47 193.7 181 56.4
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 1.4e-47 193.4 172 58.1
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.2e-46 190.3 159 59.7
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 1.2e-46 190.3 178 56.2
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 1.5e-46 189.9 178 56.7
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 3.4e-46 188.7 164 59.8
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 5.8e-46 188.0 177 56.5
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 7.5e-46 187.6 183 55.7
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 3.7e-45 185.3 162 57.4
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 3.7e-45 185.3 177 50.8
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 9.2e-44 180.6 180 53.9
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 4.6e-43 178.3 182 53.8
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 4.6e-43 178.3 135 65.9
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 3.3e-41 172.2 121 68.6
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 1.2e-40 170.2 174 56.3
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 6.2e-40 167.9 182 53.8
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 4.4e-38 161.8 170 52.4
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 9.8e-38 160.6 225 40.0
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 2.2e-37 159.5 226 39.8
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 3.2e-36 155.6 180 47.8
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 2.1e-35 152.9 133 56.4
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.5e-35 152.1 178 48.3
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 4.3e-33 145.2 132 53.8
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.2e-30 137.1 171 42.1
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.5e-30 136.7 102 65.7
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 5.8e-30 134.8 102 64.7
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 1.3e-29 133.7 144 52.1
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 2.9e-29 132.5 129 51.2
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 6.4e-29 131.3 102 62.7
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 6.4e-21 104.8 102 53.9
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.4e-20 102.8 102 53.9
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 7.1e-20 101.3 181 37.0
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 6.0e-19 98.2 104 54.8
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.3e-18 97.1 63 68.3
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 5.6e-17 91.7 183 36.1
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 2.4e-15 86.3 93 51.6
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 1.5e-14 83.6 176 29.5
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 1.9e-09 66.6 170 32.4
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 4.3e-09 65.5 116 34.5


User provided reference genes

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