Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 2.0e-189 665.6 336 100.0
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 1.3e-159 566.6 338 86.4
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.2e-156 555.8 315 91.1
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 4.3e-152 541.6 310 87.7
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 7.7e-149 530.8 311 85.5
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 3.6e-146 521.9 310 83.9
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 2.5e-144 515.8 313 84.0
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 7.7e-141 504.2 312 80.8
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 5.1e-137 491.5 322 77.0
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 3.3e-136 488.8 323 77.1
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 1.1e-134 483.8 321 77.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 1.1e-134 483.8 321 77.3
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 1.3e-127 460.3 319 75.5
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 4.1e-102 375.6 313 61.0
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.1e-99 367.5 315 59.4
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 1.2e-98 364.0 287 61.3
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 8.0e-98 361.3 287 61.3
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 4.0e-97 359.0 313 56.5
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 2.0e-96 356.7 311 59.5
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.4e-96 355.9 311 58.8
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.8e-96 355.1 311 59.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 1.3e-95 354.0 313 57.8
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.3e-95 354.0 315 56.8
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 3.7e-95 352.4 311 55.9
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 4.9e-95 352.1 288 58.7
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 3.2e-94 349.4 296 57.8
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 7.0e-94 348.2 299 57.5
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.6e-93 347.1 324 56.5
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 6.0e-93 345.1 287 58.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 3.9e-92 342.4 310 55.5
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.9e-91 340.1 319 54.2
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.1e-90 336.7 284 58.5
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.7e-90 335.5 288 55.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 6.2e-90 335.1 315 55.2
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 8.0e-90 334.7 305 55.7
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.1e-89 334.3 315 55.2
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 5.2e-89 332.0 292 57.5
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 6.8e-89 331.6 288 54.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 8.9e-89 331.3 299 55.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.0e-88 330.1 282 58.9
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.6e-88 329.7 306 56.2
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.6e-88 329.7 308 52.6
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.4e-88 329.3 330 50.9
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 4.9e-87 325.5 316 53.8
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 1.9e-86 323.6 306 54.6
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 5.4e-86 322.0 306 52.9
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 7.0e-86 321.6 300 53.7
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 7.0e-86 321.6 280 54.6
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.7e-85 319.7 284 54.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 2.7e-85 319.7 292 54.1
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 3.5e-85 319.3 285 55.4
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 3.5e-85 319.3 330 51.5
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 5.1e-84 315.5 282 56.0
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 5.1e-84 315.5 257 59.1
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.1e-84 315.5 279 53.8
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 3.3e-83 312.8 285 54.4
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 4.3e-83 312.4 289 54.0
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 5.6e-83 312.0 285 55.4
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 5.6e-83 312.0 298 53.0
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 4.7e-82 308.9 292 52.7
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 6.2e-82 308.5 286 53.8
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 8.9e-81 304.7 323 49.8
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 8.9e-81 304.7 320 51.2
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 2.6e-80 303.1 312 50.0
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 7.5e-80 301.6 230 63.9
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 6.4e-79 298.5 297 51.5
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 6.4e-79 298.5 299 49.8
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.1e-78 297.7 261 57.9
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.4e-78 297.4 283 51.9
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 1.4e-78 297.4 284 54.2
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.4e-78 297.4 290 51.4
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 1.4e-78 297.4 259 56.4
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.9e-78 297.0 288 52.1
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 6.0e-77 292.0 263 54.8
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.3e-76 290.0 278 52.5
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 5.1e-76 288.9 257 52.5
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.6e-76 288.5 287 51.9
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 8.6e-76 288.1 308 49.4
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 3.3e-75 286.2 337 45.7
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.3e-75 286.2 278 52.2
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 4.3e-75 285.8 321 49.2
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 9.5e-75 284.6 332 47.3
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 3.6e-74 282.7 280 50.4
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 6.2e-74 282.0 308 47.4
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 8.1e-74 281.6 323 46.1
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.4e-73 280.8 293 48.1
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 5.2e-73 278.9 279 51.6
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.2e-72 277.7 309 46.9
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.4e-72 275.8 309 47.2
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 9.9e-72 274.6 290 49.3
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.4e-70 270.8 228 56.1
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.6e-69 267.3 211 61.1
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 2.9e-63 246.5 289 45.3
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 4.9e-63 245.7 292 45.2
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.2e-61 241.1 269 47.6
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 2.3e-52 210.3 217 48.8
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 4.5e-48 196.1 312 39.1
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 8.4e-39 165.2 130 61.5
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 4.6e-37 159.5 133 54.9
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 6.7e-36 155.6 124 58.9
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 4.2e-30 136.3 234 32.9
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 4.2e-30 136.3 140 50.0
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.0e-28 131.7 97 72.2
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.1e-22 111.7 125 46.4
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 1.6e-21 107.8 252 32.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 1.1e-19 101.7 84 61.9
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 4.5e-16 89.7 142 38.0
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 5.9e-16 89.4 113 41.6
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 2.2e-10 70.9 95 38.9
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 6.3e-10 69.3 95 37.9
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 4.5e-08 63.2 86 38.4
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.9e-06 57.8 271 25.5
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.5e-06 57.4 190 27.4
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 3.2e-06 57.0 215 25.1
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 7.2e-06 55.8 158 25.3


User provided reference genes

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