Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 2.2e-109 399.1 216 100.0
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 5.1e-106 387.9 217 98.6
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 8.5e-101 370.5 219 93.6
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 2.5e-100 369.0 219 91.3
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 4.8e-96 354.8 220 89.1
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 5.2e-90 334.7 220 85.5
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.6e-89 332.4 220 84.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 5.7e-89 331.3 220 84.5
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 4.8e-88 328.2 220 83.6
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 8.3e-88 327.4 220 83.2
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.1e-84 317.0 220 82.7
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.3e-76 288.5 230 75.2
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 2.3e-74 282.7 227 73.1
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 3.4e-57 225.7 174 71.3
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 9.8e-57 224.2 178 69.1
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.3e-56 223.8 236 57.2
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 2.9e-56 222.6 184 66.8
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 3.7e-56 222.2 221 59.7
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 4.9e-56 221.9 179 69.8
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 8.3e-56 221.1 232 58.6
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 2.4e-55 219.5 208 61.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 4.1e-55 218.8 222 59.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.1e-55 218.8 232 56.5
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 7.1e-55 218.0 173 70.5
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 9.2e-55 217.6 224 58.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.2e-54 217.2 239 56.5
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.6e-54 216.9 211 61.1
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 2.1e-54 216.5 211 61.1
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.1e-54 216.5 229 58.1
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 2.7e-54 216.1 179 65.9
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.7e-54 216.1 176 68.2
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.5e-54 215.7 215 58.6
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.5e-54 215.7 184 65.8
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 6.0e-54 214.9 176 67.6
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 7.8e-54 214.5 218 61.0
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 7.8e-54 214.5 179 67.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.0e-53 214.2 173 68.2
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.7e-53 213.4 232 56.0
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.7e-53 213.4 223 58.7
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 2.3e-53 213.0 200 61.5
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 3.9e-53 212.2 211 56.9
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 5.1e-53 211.8 173 68.8
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 6.6e-53 211.5 211 56.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 6.6e-53 211.5 218 56.9
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 8.6e-53 211.1 231 55.8
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.1e-52 210.7 173 67.1
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.1e-52 210.7 225 57.3
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.1e-52 210.7 211 57.3
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.9e-52 209.9 226 57.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.9e-52 209.9 176 63.6
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.5e-52 209.5 224 56.7
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.3e-52 209.1 217 58.5
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.3e-52 209.1 173 67.6
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 3.3e-52 209.1 211 56.4
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.3e-52 208.8 176 65.3
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 5.6e-52 208.4 183 63.9
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.6e-52 208.4 153 72.5
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 7.3e-52 208.0 233 56.2
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 9.5e-52 207.6 233 54.1
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.6e-51 206.8 173 65.9
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.6e-51 206.8 199 61.8
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.1e-51 206.5 197 60.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 3.6e-51 205.7 214 57.5
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 3.6e-51 205.7 214 56.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 4.7e-51 205.3 189 61.4
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 6.2e-51 204.9 221 56.1
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 8.1e-51 204.5 208 59.6
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.1e-50 204.1 196 59.7
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 1.4e-50 203.8 176 64.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 2.3e-50 203.0 173 65.9
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.0e-50 202.2 172 62.2
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 6.8e-50 201.4 222 57.7
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.8e-50 201.4 173 64.2
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.2e-49 200.7 186 61.8
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 3.4e-49 199.1 176 64.2
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 9.9e-49 197.6 186 60.8
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.3e-48 197.2 217 58.5
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.9e-47 193.4 216 53.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 3.2e-47 192.6 147 68.7
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 5.4e-47 191.8 184 60.3
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 7.1e-47 191.4 183 59.6
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 9.2e-47 191.0 140 80.0
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.1e-46 189.9 147 68.0
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 2.1e-46 189.9 214 54.7
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 173 65.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.1e-46 189.9 173 65.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 2.7e-46 189.5 205 56.1
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 3.5e-46 189.1 147 68.0
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.0e-46 188.3 208 53.4
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.0e-46 188.3 173 64.7
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.3e-45 187.2 177 59.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.3e-45 187.2 207 55.6
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.7e-45 186.8 225 52.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.3e-45 186.4 165 60.0
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 8.6e-45 184.5 204 55.4
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 8.6e-45 184.5 208 52.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 1.1e-44 184.1 134 70.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.1e-44 184.1 223 52.9
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.9e-44 183.3 216 54.2
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 5.6e-44 181.8 223 51.1
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 4.7e-43 178.7 263 46.4
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 6.2e-43 178.3 165 60.6
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.4e-42 177.2 111 84.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.8e-42 176.8 161 58.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 7.6e-41 171.4 111 81.1
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.7e-40 170.2 210 51.4
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.7e-37 160.2 176 55.7
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 3.0e-37 159.5 147 61.2
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.0e-29 134.4 128 60.2
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.3e-29 133.3 199 46.7
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.0e-29 132.9 145 51.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 5.1e-29 132.1 75 93.3
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 8.7e-29 131.3 90 75.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.9e-28 130.2 144 51.4
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 3.3e-28 129.4 112 73.2
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.3e-28 129.0 144 49.3
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 5.6e-28 128.6 199 47.7
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 9.0e-26 121.3 145 47.6
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.2e-25 120.9 155 49.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.8e-24 115.9 104 54.8
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 7.6e-17 91.7 106 47.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.5e-15 85.5 165 33.9
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-06 57.8 64 57.8


User provided reference genes

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