Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 2.7e-87 325.5 185 100.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 2.4e-75 285.8 187 84.5
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 6.9e-75 284.3 183 88.0
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 3.8e-65 251.9 186 76.3
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 5.1e-62 241.5 190 74.2
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 6.7e-62 241.1 185 73.0
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.3e-60 236.9 186 72.6
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 3.5e-55 218.8 195 68.7
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 1.9e-53 213.0 190 67.9
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 2.1e-52 209.5 189 66.1
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 6.3e-52 208.0 188 66.0
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.8e-46 189.9 182 64.8
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 2.3e-46 189.5 192 62.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 2.3e-46 189.5 192 62.0
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 8.7e-46 187.6 192 60.9
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 3.7e-44 182.2 192 59.9
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.7e-44 182.2 192 59.9
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.8e-43 179.9 191 57.1
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 1.5e-34 150.2 183 52.5
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 1.5e-34 150.2 181 51.4
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 4.5e-34 148.7 171 53.8
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 5.5e-32 141.7 189 47.6
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 5.5e-32 141.7 188 50.0
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 5.5e-32 141.7 159 49.7
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.2e-31 140.6 184 47.3
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 3.6e-31 139.0 192 47.9
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.0e-30 137.5 168 50.0
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.0e-30 137.5 197 49.7
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.4e-30 137.1 170 51.2
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 1.8e-30 136.7 163 51.5
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 1.8e-30 136.7 161 50.3
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 3.0e-30 136.0 189 47.6
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 3.0e-30 136.0 178 47.8
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 5.2e-30 135.2 171 48.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 8.8e-30 134.4 190 49.5
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 8.8e-30 134.4 161 47.8
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 1.5e-29 133.7 188 48.4
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 3.3e-29 132.5 174 47.7
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 5.7e-29 131.7 173 49.7
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 5.7e-29 131.7 172 48.8
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 5.7e-29 131.7 173 47.4
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 1.3e-28 130.6 159 50.9
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.2e-28 129.8 173 46.2
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 2.2e-28 129.8 182 48.4
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 2.8e-28 129.4 180 51.7
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 3.7e-28 129.0 185 48.1
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.1e-27 127.5 191 47.6
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 1.1e-27 127.5 184 48.4
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 2.4e-27 126.3 156 50.6
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.4e-27 126.3 223 43.9
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 3.1e-27 125.9 154 50.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 7.0e-27 124.8 179 48.6
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 7.0e-27 124.8 179 48.6
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 9.1e-27 124.4 167 49.1
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.2e-26 124.0 179 48.0
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 2.0e-26 123.2 186 45.2
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 4.5e-26 122.1 161 47.8
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.0e-25 120.9 187 46.5
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.0e-25 120.9 183 45.4
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 1.3e-25 120.6 160 51.2
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 1.7e-25 120.2 182 43.4
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 2.2e-25 119.8 165 49.1
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 3.8e-25 119.0 171 47.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 5.0e-25 118.6 179 46.4
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 6.5e-25 118.2 158 51.9
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 8.5e-25 117.9 176 43.2
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 8.5e-25 117.9 158 47.5
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.1e-24 117.5 179 50.3
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.1e-24 117.5 227 38.3
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.9e-24 116.7 192 45.3
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.5e-24 116.3 175 49.1
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 5.5e-24 115.2 159 51.6
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 9.4e-24 114.4 167 46.7
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 1.2e-23 114.0 197 44.2
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.6e-23 113.6 162 46.3
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 3.6e-23 112.5 213 40.8
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 4.7e-23 112.1 175 42.9
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 4.7e-23 112.1 186 47.3
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 8.0e-23 111.3 184 41.8
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 8.0e-23 111.3 190 45.3
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.4e-22 110.5 187 41.7
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 1.8e-22 110.2 220 39.1
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 2.3e-22 109.8 159 44.7
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 4.0e-22 109.0 229 38.9
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 6.7e-22 108.2 193 40.9
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 6.7e-22 108.2 191 41.4
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 6.7e-22 108.2 189 40.7
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 1.2e-21 107.5 167 44.3
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 2.0e-21 106.7 189 43.9
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 2.0e-21 106.7 209 37.3
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.2e-20 103.2 205 40.0
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 4.8e-20 102.1 146 45.9
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 8.2e-20 101.3 176 40.3
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.8e-19 100.1 204 37.7
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 5.3e-19 98.6 150 49.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 2.0e-18 96.7 184 42.9
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.5e-18 95.9 146 41.8
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 5.9e-18 95.1 142 43.7
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 3.8e-17 92.4 143 44.8
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.1e-16 90.9 200 36.0
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 3.6e-15 85.9 146 39.7
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 6.1e-15 85.1 157 43.3
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.4e-14 84.0 162 38.9
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 3.0e-14 82.8 123 48.0
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 5.2e-14 82.0 172 36.6
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 4.4e-13 79.0 189 34.4
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.5e-13 78.2 122 47.5
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.7e-12 77.0 117 42.7
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.8e-12 76.3 161 36.6
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 2.0e-10 70.1 57 68.4
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 7.7e-10 68.2 67 58.2
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 1.3e-09 67.4 99 43.4
Actinidia21075 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.3e-09 66.6 45 68.9
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.5e-08 63.9 151 34.4
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 4.2e-08 62.4 181 33.7
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 3.6e-07 59.3 181 31.5
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis HOM05D006618 ORTHO05D008291 1.4e-06 57.4 58 55.2
SEGI_31360 Sequoiadendron giganteum HOM05D006618 ORTHO05D008291 3.0e-06 56.2 60 53.3


User provided reference genes

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