Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 2.5e-68 261.9 129 100.0
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 1.1e-66 256.5 129 97.7
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.4e-66 255.4 129 96.9
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 1.0e-64 250.0 129 94.6
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 1.0e-64 250.0 129 94.6
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 1.0e-64 250.0 127 96.9
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 2.9e-64 248.4 129 93.8
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 2.9e-64 248.4 129 93.8
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 2.9e-64 248.4 129 93.8
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 3.8e-64 248.1 129 94.6
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 3.8e-64 248.1 127 94.5
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 2.1e-62 242.3 128 93.0
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 7.4e-60 233.8 129 86.8
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 2.7e-54 215.3 124 84.7
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 1.1e-52 209.9 125 81.6
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 7.4e-52 207.2 123 80.5
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 9.7e-52 206.8 123 82.1
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 2.2e-51 205.7 126 77.8
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 2.2e-51 205.7 125 80.0
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 2.8e-51 205.3 125 80.0
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 2.8e-51 205.3 125 78.4
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 4.8e-51 204.5 129 74.4
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 6.3e-51 204.1 120 82.5
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 6.3e-51 204.1 120 82.5
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 8.2e-51 203.8 125 78.4
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 1.4e-50 203.0 124 79.0
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 2.4e-50 202.2 125 77.6
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 2.4e-50 202.2 129 73.6
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 3.1e-50 201.8 125 79.2
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 3.1e-50 201.8 121 79.3
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 5.3e-50 201.1 120 79.2
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 9.1e-50 200.3 120 80.0
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 1.6e-49 199.5 125 77.6
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 1.6e-49 199.5 130 78.5
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 4.5e-49 198.0 125 76.8
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 4.5e-49 198.0 128 78.1
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 5.9e-49 197.6 125 75.2
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 7.7e-49 197.2 125 75.2
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 7.7e-49 197.2 125 75.2
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 7.7e-49 197.2 125 74.4
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 7.7e-49 197.2 129 76.0
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 7.7e-49 197.2 125 76.8
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.0e-48 196.8 124 75.0
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.3e-48 196.4 125 74.4
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.7e-48 196.1 125 73.6
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 2.2e-48 195.7 129 76.0
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 2.2e-48 195.7 120 79.2
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 2.9e-48 195.3 120 76.7
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 3.8e-48 194.9 125 76.8
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 3.8e-48 194.9 126 73.0
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.5e-47 193.0 122 77.9
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 1.5e-47 193.0 122 75.4
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 7.2e-47 190.7 122 77.9
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 9.4e-47 190.3 127 72.4
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 2.1e-46 189.1 123 75.6
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 3.6e-46 188.3 131 71.8
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 6.1e-46 187.6 120 75.8
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 6.1e-46 187.6 120 75.0
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 6.1e-46 187.6 126 71.4
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 1.0e-45 186.8 155 63.2
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.4e-45 186.4 123 75.6
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.4e-45 186.4 136 69.9
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.8e-45 186.0 138 68.1
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 8.8e-45 183.7 125 72.0
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.0e-44 182.6 122 73.8
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 2.6e-44 182.2 120 72.5
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 3.3e-44 181.8 120 71.7
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 7.5e-44 180.6 149 64.4
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 4.8e-43 177.9 121 71.1
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 4.8e-43 177.9 126 66.7
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 6.3e-43 177.6 102 83.3
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.8e-42 176.0 125 67.2
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 4.5e-41 171.4 127 66.1
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 5.9e-41 171.0 121 67.8
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 1.0e-40 170.2 123 68.3
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.2e-40 169.1 121 66.1
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 6.5e-40 167.5 123 65.0
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 6.5e-40 167.5 184 51.1
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 1.6e-38 162.9 103 75.7
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.3e-37 159.1 120 62.5
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 4.4e-36 154.8 152 55.3
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 1.3e-35 153.3 75 98.7
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 1.7e-35 152.9 121 56.2
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 6.3e-35 151.0 123 62.6
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 7.0e-34 147.5 90 77.8
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 4.7e-30 134.8 125 56.8
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 1.0e-29 133.7 82 78.0
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 2.0e-28 129.4 75 85.3
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 2.8e-27 125.6 120 56.7
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 6.3e-27 124.4 75 77.3
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 6.3e-27 124.4 88 69.3
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 8.3e-27 124.0 79 74.7
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 1.6e-25 119.8 75 76.0
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 3.5e-25 118.6 75 72.0
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 3.0e-21 105.5 125 46.4
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 4.0e-21 105.1 116 50.9
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.6e-20 102.4 122 50.0
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 1.2e-17 93.6 71 63.4
RcHm_v2.0_Chr5g0002331 Rosa chinensis HOM05D007052 ORTHO05D008871 5.0e-16 88.2 50 84.0
PRCOL_00003846 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 1.2e-14 83.6 139 36.7
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.6e-14 83.2 123 42.3
FAN25G3667 Fragaria x ananassa HOM05D007052 ORTHO05D008871 4.0e-13 78.6 44 81.8
MCO13G382 Micromonas commoda HOM05D007052 ORTHO05D008871 1.1e-10 70.5 148 33.8
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 5.4e-10 68.2 36 88.9
PRCOL_00004464 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 7.0e-10 67.8 119 32.8
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 1.6e-09 66.6 48 64.6
Nitab4.5_0007209g0010 Nicotiana tabacum HOM05D007052 ORTHO05D008871 1.5e-07 60.1 39 66.7
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 3.3e-07 58.9 36 75.0
MCO14G271 Micromonas commoda HOM05D007052 ORTHO05D008871 4.3e-07 58.5 119 37.8
PRCOL_00003373 Prasinoderma coloniale HOM05D007052 ORTHO05D008871 7.3e-07 57.8 127 33.1


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